RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 AZIN1O14977 448 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 ZSCAN9O15535 394 aaPredicted RBP13.68□□□□□ -0.22
SKA2-205ENST00000580541 ULK1O75385 1050 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 OR4F21O95013 312 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 SLC35G6P0C7Q6 338 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 JMJD7P0C870 316 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 TSPAN8P19075 237 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
SKA2-205ENST00000580541 TSPAN7P41732 249 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 PIK3CBP42338 1070 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 SCTRP47872 440 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RPL14P50914 215 aaKnown RBP13.68□□□□□ -0.22
SKA2-205ENST00000580541 RAB15P59190 212 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 ERVPABLB-1P60509 514 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RGS1Q08116 209 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 BST1Q10588 318 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 TRAF3Q13114 568 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 PWP1Q13610 501 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FAM214AQ32MH5 1076 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FRG2Q64ET8 278 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RGS9BPQ6ZS82 235 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 CHSY3Q70JA7 882 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RNF44Q7L0R7 432 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RAB11FIP2Q7L804 512 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 SYVN1Q86TM6 617 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 CRLF3Q8IUI8 442 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RCBTB1Q8NDN9 531 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 WDR36Q8NI36 951 aaKnown RBP13.68□□□□□ -0.22
SKA2-205ENST00000580541 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FCRL4Q96PJ5 515 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FRG2BQ96QU4 278 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 ZPBPQ9BS86 351 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RHBGQ9H310 441 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FBXO8Q9NRD0 319 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FGF21Q9NSA1 209 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 RARRES3Q9UL19 164 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 SH2B3Q9UQQ2 575 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 TRAF6Q9Y4K3 522 aa13.68□□□□□ -0.22
SKA2-205ENST00000580541 FEZF1A0PJY2 475 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 EFCAB7A8K855 629 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 FOXE1O00358 373 aaPredicted RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 POLR1CO15160 346 aaPredicted RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 CLEC3AO75596 197 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 CAPN1P07384 714 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 HBQ1P09105 142 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 PCNAP12004 261 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 PTX3P26022 381 aaPredicted RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 ITGA1P56199 1179 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 SKP1P63208 163 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 YBX1P67809 324 aaKnown RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 MC2RQ01718 297 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 MEF2AQ02078 507 aaPredicted RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 FOXM1Q08050 763 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 TGM3Q08188 693 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 ZIC1Q15915 447 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 SH2D4BQ5SQS7 431 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 YOD1Q5VVQ6 348 aaPredicted RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 NIPAL1Q6NVV3 410 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 RPS27LQ71UM5 84 aaKnown RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 B3GNT8Q7Z7M8 397 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 CDYL2Q8N8U2 506 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 SRFBP1Q8NEF9 429 aaKnown RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 SLC13A3Q8WWT9 602 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 CDK15Q96Q40 435 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 OR2A5Q96R48 311 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 ASPSCR1Q9BZE9 553 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 SLC7A5P2Q9GIP4 190 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 FAM60AQ9NP50 221 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 VTI1BQ9UEU0 232 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
SKA2-205ENST00000580541 MDC1Q14676 2089 aaKnown RBP13.67□□□□□ -0.22
SKA2-205ENST00000580541 TMEM150CB9EJG8 249 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 H0YGG7 62 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 PPP6CO00743 305 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 UBFD1O14562 309 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 LCMT2O60294 686 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 CTSVO60911 334 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 SNNO75324 88 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 OR2B3O76000 313 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 EIF2S1P05198 315 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 SERPINA6P08185 405 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 HSD3B1P14060 373 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 HSD3B2P26439 372 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 ID4P47928 161 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 ARSFP54793 590 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 EMP3P54852 163 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 ARF3P61204 181 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 STXBP1P61764 594 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 TARDBPQ13148 414 aaKnown RBP eCLIP13.66□□□□□ -0.22
SKA2-205ENST00000580541 TUBB3Q13509 450 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms