RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 YBX1P67809 324 aaKnown RBP13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SHC2P98077 582 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 RCN2Q14257 317 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SLBPQ14493 270 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC01543-201ENST00000578367 GRM7Q14831 915 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 RBBP7Q16576 425 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 RNF165Q6ZSG1 346 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 TM4SF19Q96DZ7 209 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 NSUN5Q96P11 429 aaKnown RBP13.27□□□□□ -0.29
LINC01543-201ENST00000578367 CCT7Q99832 543 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 MECRQ9BV79 373 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
LINC01543-201ENST00000578367 INTS9Q9NV88 658 aaKnown RBP13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SLC39A1Q9NY26 324 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SNX6Q9UNH7 406 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SRPK3Q9UPE1 567 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 KLHL20Q9Y2M5 609 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 MSRB2Q9Y3D2 182 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 PCDHB3Q9Y5E6 796 aa13.27□□□□□ -0.29
LINC01543-201ENST00000578367 SERTM1A2A2V5 107 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 ANKDD1BA6NHY2 528 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 TMEM150CB9EJG8 249 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 H3BMH7 237 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 FOXE1O00358 373 aaPredicted RBP13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OR1F1O43749 312 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 KRT6AP02538 564 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 KRT6BP04259 564 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 SERPINA6P08185 405 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 HGFP14210 728 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 CD22P20273 847 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
LINC01543-201ENST00000578367 BCL6P41182 706 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 KRT6CP48668 564 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 KNTC1P50748 2209 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 FOXM1Q08050 763 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 RGS1Q08116 209 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 CAMK2BQ13554 666 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 CHI3L2Q15782 390 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 NDUFA9Q16795 377 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 PRTGQ2VWP7 1150 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 ASPGQ86U10 573 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OR4F6Q8NGB9 312 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OR52B6Q8NGF0 335 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 NT5CQ8TCD5 201 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 AGAP11Q8TF27 550 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 SLC13A3Q8WWT9 602 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 MVB12AQ96EY5 273 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 LRFN5Q96NI6 719 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 SLC46A1Q96NT5 459 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OR6C1Q96RD1 312 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 PAIP2Q9BPZ3 127 aaKnown RBP13.26□□□□□ -0.29
LINC01543-201ENST00000578367 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 CLK4Q9HAZ1 481 aaKnown RBP13.26□□□□□ -0.29
LINC01543-201ENST00000578367 THAP1Q9NVV9 213 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 ACSL6Q9UKU0 697 aa13.26□□□□□ -0.29
LINC01543-201ENST00000578367 A0A0J9YVX5 310 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 H0YGG7 62 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 HYAL3O43820 417 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 LCMT2O60294 686 aaKnown RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 OR2B3O76000 313 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 UROSP10746 265 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 CCL4P13236 92 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 HSD3B1P14060 373 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 CHN1P15882 459 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 HSD3B2P26439 372 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 RBMS1P29558 406 aaKnown RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 ARL1P40616 181 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 ERVPABLB-1P60509 514 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 STXBP1P61764 594 aaKnown RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 SKP1P63208 163 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 SH3BP2P78314 561 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 FOXC1Q12948 553 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 IFT88Q13099 833 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 STX3Q13277 289 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 FAM53BQ14153 422 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 MAP7Q14244 749 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 RBBP5Q15291 538 aaKnown RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 TMEM35AQ53FP2 167 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 WASHC2DQ5SRD0 308 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 GBP7Q8N8V2 638 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 SRFBP1Q8NEF9 429 aaKnown RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 NXPE2Q96DL1 559 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 DPH2Q9BQC3 489 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 CENPKQ9BS16 269 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 MANSC1Q9H8J5 431 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms