RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
MKS1-206ENST00000577824 ETV5P41161 510 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 CDH13P55290 713 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 ITGA1P56199 1179 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 GPS2Q13227 327 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 RCN2Q14257 317 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PRTGQ2VWP7 1150 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 DEFB110Q30KQ9 67 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 HSP90B2PQ58FF3 399 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 C3orf38Q5JPI3 329 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 CES4AQ5XG92 561 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 TMIGD1Q6UXZ0 262 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 ERMP1Q7Z2K6 904 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PPP1R3BQ86XI6 285 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 NUDCD3Q8IVD9 361 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 MCATQ8IVS2 390 aaKnown RBP12.14□□□□□ -0.47
MKS1-206ENST00000577824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.14□□□□□ -0.47
MKS1-206ENST00000577824 TBC1D19Q8N5T2 526 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 OR4F6Q8NGB9 312 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 OR1L3Q8NH93 324 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 TRPC4APQ8TEL6 797 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 UBE2E3Q969T4 207 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 CNDP1Q96KN2 507 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 SCNM1Q9BWG6 230 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 SLC29A3Q9BZD2 475 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 DRC3Q9H069 523 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 ACTR8Q9H981 624 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 HAO1Q9UJM8 370 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 ZNF490Q9ULM2 529 aaPredicted RBP12.14□□□□□ -0.47
MKS1-206ENST00000577824 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PCDHGA7Q9Y5G6 932 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 PCDHGA11Q9Y5H2 935 aa12.14□□□□□ -0.47
MKS1-206ENST00000577824 LOC105369274A0A096LPK9 316 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 LOC102723532A0A0G2JNH3 316 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 A0A0J9YVX5 310 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 FEZF1A0PJY2 475 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TMEM114B3SHH9 223 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TMEM150CB9EJG8 249 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 H0YGG7 62 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TXNDC9O14530 226 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 POLR1CO15160 346 aaPredicted RBP12.13□□□□□ -0.47
MKS1-206ENST00000577824 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
MKS1-206ENST00000577824 ENO1P06733 434 aaKnown RBP12.13□□□□□ -0.47
MKS1-206ENST00000577824 CTSBP07858 339 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 HGFP14210 728 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 GRK2P25098 689 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ARRB2P32121 409 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
MKS1-206ENST00000577824 GABREP78334 506 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 MEF2AQ02078 507 aaPredicted RBP12.13□□□□□ -0.47
MKS1-206ENST00000577824 ZNF33BQ06732 778 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 CYP4F3Q08477 520 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 PWP1Q13610 501 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 CFAP157Q5JU67 520 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 MANEAQ5SRI9 462 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 HHATQ5VTY9 493 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 MED27Q6P2C8 311 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 CEACAM20Q6UY09 585 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 GPRIN3Q6ZVF9 776 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 VN1R5Q7Z5H4 357 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 SYVN1Q86TM6 617 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 PLD3Q8IV08 490 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 OR4N4Q8N0Y3 316 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TRPV3Q8NET8 790 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 OR7G3Q8NG95 312 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 CREB3L4Q8TEY5 395 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 PMEPA1Q969W9 287 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 NXPE2Q96DL1 559 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 MOCOSQ96EN8 888 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 TAAR9Q96RI9 348 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ASPSCR1Q9BZE9 553 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 SLC39A1Q9NY26 324 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 PISDQ9UG56 409 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 ADGRE2Q9UHX3 823 aa12.13□□□□□ -0.47
MKS1-206ENST00000577824 C9orf172C9J069 976 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 P2RX6O15547 441 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 OR1F1O43749 312 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SNNO75324 88 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 CLEC3AO75596 197 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 TIAF1O95411 115 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 TBX6O95947 436 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms