RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 HPS4Q9NQG7 708 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 C8orf4Q9NR00 106 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 MRPL17Q9NRX2 175 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 TUBA8Q9NY65 449 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 DNAJB9Q9UBS3 223 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TDRKHQ9Y2W6 561 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 OARD1Q9Y530 152 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GREB1Q4ZG55 1949 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PTPRDP23468 1912 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 A0A0J9YVX5 310 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CDC14CA4D256 554 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 KLHL33A6NCF5 533 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 NPIPB15A6NHN6 443 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 H7C0S8 307 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RFXANKO14593 260 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BCL10O95999 233 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 NPPAP01160 153 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 FTH1P02794 183 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 ACRV1P26436 265 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CD70P32970 193 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TTKP33981 857 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 POLR2IP36954 125 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 HTRA3P83110 453 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LMAN2Q12907 356 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 KCNAB2Q13303 367 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PTCHD3Q3KNS1 767 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 KLHL35Q6PF15 583 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 R3HCC1LQ7Z5L2 792 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 TMEM132CQ8N3T6 1108 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RNF175Q8N4F7 328 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CHCHD4Q8N4Q1 142 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CPA6Q8N4T0 437 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LEMD2Q8NC56 503 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PDPRQ8NCN5 879 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GPR26Q8NDV2 337 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BPIFB1Q8TDL5 484 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 MYLIPQ8WY64 445 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ITCHQ96J02 903 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 EGLN2Q96KS0 407 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DHRS1Q96LJ7 313 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 INPP5KQ9BT40 448 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RIBC2Q9H4K1 309 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CWH43Q9H720 699 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RMND5AQ9H871 391 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CARS2Q9HA77 564 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 PLGRKTQ9HBL7 147 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ZNF334Q9HCZ1 680 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 TBC1D23Q9NUY8 699 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 KCTD5Q9NXV2 234 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SLC22A14Q9Y267 594 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DLGAP4Q9Y2H0 992 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TRPM7Q96QT4 1865 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 NLRC5Q86WI3 1866 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 H3BMQ9 156 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 J3QRK9 145 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BRINP1O60477 761 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CREG1O75629 220 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PDYNP01213 254 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 IL6P05231 212 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 OR56A5P0C7T3 313 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CCNA2P20248 432 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 XPAP23025 273 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 JAK1P23458 1154 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TACR1P25103 407 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RECQLP46063 649 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 HLCSP50747 726 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LSM3P62310 102 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 NKX3-2P78367 333 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 IRF8Q02556 426 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GPNMBQ14956 572 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 MINDY4Q4G0A6 757 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ATP13A5Q4VNC0 1218 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 IRAK1BP1Q5VVH5 260 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 OR4F3Q6IEY1 312 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CES5AQ6NT32 575 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DOK6Q6PKX4 331 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 USP45Q70EL2 814 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SYT12Q8IV01 421 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ADHFE1Q8IWW8 467 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 AADATQ8N5Z0 425 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 OR8J3Q8NGG0 315 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SLC22A17Q8WUG5 538 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 OVCA2Q8WZ82 227 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 FBXL8Q96CD0 374 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PDLIM5Q96HC4 596 aaKnown RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 SGCZQ96LD1 299 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 COG8Q96MW5 612 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ZNF558Q96NG5 402 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 COL25A1Q9BXS0 654 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 SEMA6CQ9H3T2 930 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 NTN4Q9HB63 628 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ABCB8Q9NUT2 735 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 NDOR1Q9UHB4 597 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BLOC1S6Q9UL45 172 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 OR2AG2A6NM03 316 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 hCG_2039718K7EN88 272 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 AREL1O15033 823 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 RECQL5O94762 991 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms