RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ELAVL4P26378 380 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 NPBWR1P48145 328 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 LINC01547P58512 204 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 GUCY2DQ02846 1103 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 CBX3Q13185 183 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 RBM39Q14498 530 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 PPA1Q15181 289 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 HLA-BQ31612 363 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ANKRD20A4Q4UJ75 823 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 PHLDA2Q53GA4 152 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 LACTB2Q53H82 288 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 ANKRD20A8PQ5CZ79 823 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ZNF789Q5FWF6 425 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 SPDYCQ5MJ68 293 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 FFAR4Q5NUL3 377 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ANKRD20A2Q5SQ80 823 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ANKRD20A1Q5TYW2 823 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ANKRD20A3Q5VUR7 823 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 TXNRD3NBQ6F5E7 133 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 FAM53AQ6NSI3 398 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 PLBD1Q6P4A8 553 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ARHGAP11AQ6P4F7 1023 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 C15orf39Q6ZRI6 1047 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 USP43Q70EL4 1123 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 CHMP1BQ7LBR1 199 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ZNF444Q8N0Y2 327 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 GPC2Q8N158 579 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ATAD1Q8NBU5 361 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 UXS1Q8NBZ7 420 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ADAD2Q8NCV1 583 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 OR6S1Q8NH40 331 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 FIBINQ8TAL6 211 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 PIGBQ92521 554 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 NSMAFQ92636 917 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 CORO2AQ92828 525 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ST6GALNAC6Q969X2 333 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 CCDC47Q96A33 483 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 PYCR2Q96C36 320 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 USP28Q96RU2 1077 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 SYT15Q9BQS2 421 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 UTP14AQ9BVJ6 771 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 TDRD1Q9BXT4 1180 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 UBQLN3Q9H347 655 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 THAP9Q9H5L6 903 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 C10orf88Q9H8K7 445 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 MINDY3Q9H8M7 445 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 MTHFD2LQ9H903 347 aaPredicted RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 RPF1Q9H9Y2 349 aaKnown RBP2.25□□□□□ -2.05
COPS3-213ENST00000577210 FGF22Q9HCT0 170 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 DNAJC4Q9NNZ3 241 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ATAD3AQ9NVI7 634 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 MOSPD1Q9UJG1 213 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 ITM2BQ9Y287 266 aa2.25□□□□□ -2.05
COPS3-213ENST00000577210 TRAV18A0A075B6X5 111 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 C2orf92A0A1B0GVN3 265 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 ILVBLA1L0T0 632 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 FAM149AA5PLN7 773 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 C5orf52A6NGY3 159 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 MSGN1A6NI15 193 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 C19orf81C9J6K1 198 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 DDX39AO00148 427 aaKnown RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 ST8SIA3O43173 380 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 GRID2O43424 1007 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 HTATSF1O43719 755 aaKnown RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 SCO2O43819 266 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 FCGR3BO75015 233 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 NME6O75414 186 aaPredicted RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 REC8O95072 547 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 GSRP00390 522 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 NGFP01138 241 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 AMBPP02760 352 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 RLN1P04808 185 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 GPIP06744 558 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 STAG3L1P0CL83 205 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 RPL35AP18077 110 aaKnown RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 LBPP18428 481 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 LHCGRP22888 699 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 MAP2K2P36507 400 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 DNA2P51530 1060 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 PAX9P55771 341 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 UBASH3AP57075 661 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 YBEYP58557 167 aaPredicted RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 BPIFB3P59826 476 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 PTENP60484 403 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 ERVK11-1P61568 191 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 GNB1P62873 340 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 RASGEF1BQ0VAM2 473 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 CETN1Q12798 172 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 EFTUD2Q15029 972 aaKnown RBP eCLIP2.24□□□□□ -2.052e-6■■■■■ 32.8
COPS3-213ENST00000577210 NONOQ15233 471 aaKnown RBP eCLIP2.24□□□□□ -2.05
COPS3-213ENST00000577210 PTPN14Q15678 1187 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 ZNF74Q16587 644 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 MEP1BQ16820 701 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 CTU2Q2VPK5 515 aaKnown RBP2.24□□□□□ -2.05
COPS3-213ENST00000577210 ZFP69Q49AA0 526 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 SLC39A12Q504Y0 691 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 GLRA4Q5JXX5 417 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 CEP85LQ5SZL2 805 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
COPS3-213ENST00000577210 BSPRYQ5W0U4 402 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms