RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 HEATR5BQ9P2D3 2071 aa23.05■■□□□ 1.28
ATPAF1-213ENST00000574428 OR2A25A4D2G3 310 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 SLC28A1O00337 649 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 KIF1CO43896 1103 aaKnown RBP23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 FKBP9O95302 570 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 ST6GAL1P15907 406 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 CFHR1Q03591 330 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 CYP4F3Q08477 520 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 NR6A1Q15406 480 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 IMPG1Q17R60 797 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 LARP4Q71RC2 724 aaKnown RBP eCLIP23.04■■□□□ 1.283e-7■□□□□ 10.9
ATPAF1-213ENST00000574428 IFI44Q8TCB0 444 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 STON2Q8WXE9 905 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 MAP3K3Q99759 626 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 PITHD1Q9GZP4 211 aaPredicted RBP23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 SYNPO2LQ9H987 977 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 KLHL3Q9UH77 587 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 RGS14O43566 566 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 PEX11AO75192 247 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 SH3BGRLO75368 114 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 ZIC1Q15915 447 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 GALNTL6Q49A17 601 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 TMEM198Q66K66 360 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 HOMEZQ8IX15 550 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 BAHD1Q8TBE0 780 aaPredicted RBP23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 RHBDD1Q8TEB9 315 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 CNDP2Q96KP4 475 aaKnown RBP23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 FCRL4Q96PJ5 515 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 CCDC28BQ9BUN5 200 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 RAB33BQ9H082 229 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 NT5DC2Q9H857 520 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 DMRT3Q9NQL9 472 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 EPHA6Q9UF33 1036 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 KLK4Q9Y5K2 254 aa23.04■■□□□ 1.28
ATPAF1-213ENST00000574428 LSM1O15116 133 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 CTSVO60911 334 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 LRP3O75074 770 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 CD59P13987 128 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 SCTRP47872 440 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 RPS13P62277 151 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 CSTF3Q12996 717 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 CEP70Q8NHQ1 597 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 ZUFSPQ96AP4 578 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 ZDHHC12Q96GR4 267 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 MARK4Q96L34 752 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 RHBGQ9H310 441 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 TMEM9Q9P0T7 183 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 ANKMY1Q9P2S6 941 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 G3BP2Q9UN86 482 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 SLC12A4Q9UP95 1085 aa23.03■■□□□ 1.28
ATPAF1-213ENST00000574428 OTOGLQ3ZCN5 2332 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 SLC9B1P1A6NJY1 282 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 VPS4BO75351 444 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 ETHE1O95571 254 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 STATHP02808 62 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 EZRP15311 586 aaKnown RBP23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 ZNF33BQ06732 778 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 SLC14A1Q13336 389 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 AASDHQ4L235 1098 aaPredicted RBP23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 LACTB2Q53H82 288 aaPredicted RBP23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 C10orf62Q5T681 223 aaPredicted RBP23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 GBP7Q8N8V2 638 aaPredicted RBP23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 TRAPPC9Q96Q05 1148 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 NUDT22Q9BRQ3 303 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 KCNH6Q9H252 994 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 TSC22D4Q9Y3Q8 395 aa23.02■■□□□ 1.28
ATPAF1-213ENST00000574428 SERTM1A2A2V5 107 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 ANKDD1BA6NHY2 528 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 LDOC1O95751 146 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 RPLP0P05388 317 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 TGM1P22735 817 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 PIK3CBP42338 1070 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 DUSP3P51452 185 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 CCL7P80098 99 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 NAA25Q14CX7 972 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 ATP6AP1LQ52LC2 224 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 SPDYAQ5MJ70 313 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 MTDHQ86UE4 582 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 TBC1D19Q8N5T2 526 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 C19orf47Q8N9M1 422 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 SYNDIG1Q9H7V2 258 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 BRF2Q9HAW0 419 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 C1GALT1Q9NS00 363 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 PCDHGA4Q9Y5G9 962 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 ASXL3Q9C0F0 2248 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 TLCD2A6NGC4 264 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 FOXE1O00358 373 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 SH3BP5O60239 455 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 RASSF9O75901 435 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 TGFB1P01137 390 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 PRR35P0CG20 571 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 PHEXP78562 749 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 C6orf136Q5SQH8 315 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 FBXO42Q6P3S6 717 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 PLXDC1Q8IUK5 500 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 NAXDQ8IW45 347 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 MFSD9Q8NBP5 474 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 SARGQ9BW04 601 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 NMUR2Q9GZQ4 415 aa23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 FTSJ1Q9UET6 329 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms