RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MFSD9Q8NBP5 474 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 TRPV3Q8NET8 790 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC13A3Q8WWT9 602 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 ESAMQ96AP7 390 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 RNF31Q96EP0 1072 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 MVB12AQ96EY5 273 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PTCD3Q96EY7 689 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 EFCAB11Q9BUY7 163 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 TMEM109Q9BVC6 243 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PRM3Q9NNZ6 103 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 DHCR7Q9UBM7 475 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 CROTQ9UKG9 612 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PADI2Q9Y2J8 665 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 DMXL2Q8TDJ6 3036 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 A0A1W2PPM1 405 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 URADA6NGE7 173 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF891A8MT65 544 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 TK2O00142 265 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 RAB40ALP0C0E4 278 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 KRT4P19013 534 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 BCL6P41182 706 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 AGTR2P50052 363 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 REEP5Q00765 189 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 MEF2AQ02078 507 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 RGS1Q08116 209 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 DNASE1L3Q13609 305 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 PWP1Q13610 501 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 FAM53BQ14153 422 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 RBBP5Q15291 538 aaKnown RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 TBCCQ15814 346 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 PRTGQ2VWP7 1150 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 KRT71Q3SY84 523 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 NIPAL1Q6NVV3 410 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF517Q6ZMY9 492 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC22A9Q8IVM8 553 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 TEX9Q8N6V9 391 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC38A9Q8NBW4 561 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 UBE2E3Q969T4 207 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 ATP6V1E2Q96A05 226 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCDC126Q96EE4 140 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 PHF21BQ96EK2 531 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC45A3Q96JT2 553 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 GBP5Q96PP8 586 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 CHST8Q9H2A9 424 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 NT5DC2Q9H857 520 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 IFT80Q9P2H3 777 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 LGALS13Q9UHV8 139 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZFP69BQ9UJL9 534 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 MID2Q9UJV3 735 aa12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 RUVBL1Q9Y265 456 aaKnown RBP12.18□□□□□ -0.46
TRAPPC1-206ENST00000573989 FER1L5A0AVI2 2057 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 ANKDD1BA6NHY2 528 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 NDUFS4O43181 175 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 LCMT2O60294 686 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 SERPIND1P05546 499 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CTSBP07858 339 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 MYZAPP0CAP1 466 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 LIFP15018 202 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 VARSP26640 1264 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 EEF1DP29692 281 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CRHR1P34998 444 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 ARL1P40616 181 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 GCGRP47871 477 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 SCTRP47872 440 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 AVPR1BP47901 424 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CXADRP78310 365 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CHIT1Q13231 466 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 HKDC1Q2TB90 917 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 C1orf189Q5VU69 101 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 FAM199XQ6PEV8 388 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 TMIGD1Q6UXZ0 262 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 TM4SF19Q96DZ7 209 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 RUFY1Q96T51 708 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 DRC3Q9H069 523 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 RRAGDQ9NQL2 400 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 TMEM216Q9P0N5 145 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 FARSAQ9Y285 508 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 PCDHGA6Q9Y5G7 932 aa12.17□□□□□ -0.46
TRAPPC1-206ENST00000573989 PTPRQQ9UMZ3 2332 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 K7ENP7 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms