RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 AGAP5A6NIR3 686 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 NUAK1O60285 661 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 PRMT3O60678 531 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 OR56A5P0C7T3 313 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SERPINB1P30740 379 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CTSKP43235 329 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CSNK2BP67870 215 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 ELP6Q0PNE2 266 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 DDX39BQ13838 428 aaKnown RBP18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CARTPTQ16568 116 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 TCTN1Q2MV58 587 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 STEAP3Q658P3 488 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SERPINA13PQ6UXR4 307 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 FCGR1BQ92637 280 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 GGHQ92820 318 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 FEVQ99581 238 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CLSTN3Q9BQT9 956 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SP140LQ9H930 580 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 VPS29Q9UBQ0 182 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 PCDHGB3Q9Y5G1 929 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 GFYI3L273 518 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 DSCR3O14972 297 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SUV39H1O43463 412 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 DPM1O60762 260 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 GCM2O75603 506 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-206ENST00000573852 LHCGRP22888 699 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 GGT2P36268 569 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CSNK1DP48730 415 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SOWAHCQ53LP3 525 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-206ENST00000573852 DNAJC22Q8N4W6 341 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 SCAIQ8N9R8 606 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 FAM83FQ8NEG4 500 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-206ENST00000573852 LYSMD1Q96S90 227 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 RNF167Q9H6Y7 350 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 CPNE5Q9HCH3 593 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 TESMINQ9Y4I5 508 aa18.41■□□□□ 0.54
SCARF1-206ENST00000573852 IGLV3-16A0A075B6K0 115 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 EIF3FO00303 357 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-206ENST00000573852 SH3BGRLO75368 114 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 PCSK2P16519 638 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 TNFRSF1BP20333 461 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 SERPINA4P29622 427 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 NUDT6P53370 316 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 IRF8Q02556 426 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 TBCEQ15813 527 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-206ENST00000573852 TPRG1Q6ZUI0 275 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 DUSP26Q9BV47 211 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 PLCXD1Q9NUJ7 323 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 YIPF1Q9Y548 306 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 A0A1W2PQ67 120 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 ISPDA4D126 451 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 GABRR3A8MPY1 467 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 BNIP3LO60238 219 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 IGSF6O95976 241 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 CDK1P06493 297 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 MAPK8P45983 427 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 SLC46A3Q7Z3Q1 461 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 NPAS4Q8IUM7 802 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 ARL14EPQ8N8R7 260 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-206ENST00000573852 WDR20Q8TBZ3 569 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 SCRN2Q96FV2 425 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 TMEM175Q9BSA9 504 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 POU2F3Q9UKI9 436 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 ITGB1BP2Q9UKP3 347 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 RBMX2Q9Y388 322 aaKnown RBP18.4■□□□□ 0.54
SCARF1-206ENST00000573852 LYVE1Q9Y5Y7 322 aa18.4■□□□□ 0.54
SCARF1-206ENST00000573852 C1orf226A1L170 272 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 TAF4O00268 1085 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 KCNK2O95069 426 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 SPNP16150 400 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 PTPN5P54829 565 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 GAB1Q13480 694 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 BCL2A1Q16548 175 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 LRRC73Q5JTD7 316 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.39■□□□□ 0.54
SCARF1-206ENST00000573852 Q6ZNB5 142 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 NAGSQ8N159 534 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 SLC5A8Q8N695 610 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 POC5Q8NA72 575 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 CDADC1Q9BWV3 514 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 RAD18Q9NS91 495 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 FKBP14Q9NWM8 211 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 ADPRHL2Q9NX46 363 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 PADI2Q9Y2J8 665 aa18.39■□□□□ 0.54
SCARF1-206ENST00000573852 CLCA1A8K7I4 914 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 MTX2O75431 263 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 STK19P49842 368 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-206ENST00000573852 LMAN2Q12907 356 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 CSTF3Q12996 717 aaKnown RBP18.39■□□□□ 0.53
SCARF1-206ENST00000573852 RGNQ15493 299 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 XKR6Q5GH73 641 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 ADNP2Q6IQ32 1131 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 USP43Q70EL4 1123 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 OR2AP1Q8NGE2 309 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF461Q8TAF7 563 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 MYDGFQ969H8 173 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 DOHHQ9BU89 302 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 MIR1-1HGQ9H1L0 117 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms