RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PPANQ9NQ55 473 aaKnown RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 GRHL1Q9NZI5 618 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 PCDHGA10Q9Y5H3 936 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 TCP11X1B4DZS4 312 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 IPO13O94829 963 aaKnown RBP16.52■□□□□ 0.24
SMG6-214ENST00000573827 CDH1P12830 882 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 ACPPP15309 386 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 AP1S2P56377 157 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 TAS2R39P59534 338 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 TMEM205Q6UW68 189 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 C17orf64Q86WR6 236 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 PDSS2Q86YH6 399 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 C17orf53Q8N3J3 647 aaPredicted RBP16.52■□□□□ 0.24
SMG6-214ENST00000573827 SPATA4Q8NEY3 305 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 OR9A4Q8NGU2 314 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 PYCR2Q96C36 320 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 FBXL8Q96CD0 374 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 MMABQ96EY8 250 aaPredicted RBP16.52■□□□□ 0.24
SMG6-214ENST00000573827 LHPPQ9H008 270 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 SPNS1Q9H2V7 528 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 MKKSQ9NPJ1 570 aaPredicted RBP16.52■□□□□ 0.24
SMG6-214ENST00000573827 SLAMF7Q9NQ25 335 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 C14orf105Q9NVL8 296 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 NTNG1Q9Y2I2 539 aa16.52■□□□□ 0.24
SMG6-214ENST00000573827 FEZF1A0PJY2 475 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 KLHL41O60662 606 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 JRKO75564 520 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 PIAS1O75925 651 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 KLHL18O94889 574 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 BMP10O95393 424 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 NSA2O95478 260 aaKnown RBP16.51■□□□□ 0.23
SMG6-214ENST00000573827 CCND1P24385 295 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 SOX11P35716 441 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 PAFAH1B1P43034 410 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 EMP2P54851 167 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
SMG6-214ENST00000573827 ZNF460Q14592 562 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 DUPD1Q68J44 220 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 SLC26A11Q86WA9 606 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 AFAP1L2Q8N4X5 818 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 MFSD9Q8NBP5 474 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 KCT2Q8NC54 265 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 PPP4R1Q8TF05 950 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 ANKRD49Q8WVL7 239 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 PSMG3-AS1Q96PY0 264 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 ERP44Q9BS26 406 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 ZNF160Q9HCG1 818 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 ARL15Q9NXU5 204 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 NOVA2Q9UNW9 492 aaKnown RBP16.51■□□□□ 0.23
SMG6-214ENST00000573827 SCN3AQ9NY46 2000 aa16.51■□□□□ 0.23
SMG6-214ENST00000573827 CRYBG3Q68DQ2 2970 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 IGHV1-45A0A0A0MS14 117 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 H0YIG0 161 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 CDC7O00311 574 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 PRPF4O43172 522 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMG6-214ENST00000573827 RAD51CO43502 376 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 ENO2P09104 434 aaPredicted RBP16.5■□□□□ 0.23
SMG6-214ENST00000573827 PCOLCEQ15113 449 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 AGAP7PQ5VUJ5 663 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 CAPN13Q6MZZ7 669 aaPredicted RBP16.5■□□□□ 0.23
SMG6-214ENST00000573827 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 STRA8Q7Z7C7 330 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 CEP97Q8IW35 865 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 EFCAB3Q8N7B9 438 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 ZNF740Q8NDX6 193 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 ANKRD7Q92527 254 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 MOCOSQ96EN8 888 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 THOC3Q96J01 351 aaKnown RBP16.5■□□□□ 0.23
SMG6-214ENST00000573827 IMMP1LQ96LU5 166 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 AGAP4Q96P64 663 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 WDR77Q9BQA1 342 aaPredicted RBP16.5■□□□□ 0.23
SMG6-214ENST00000573827 ASF1BQ9NVP2 202 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 WHRNQ9P202 907 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMG6-214ENST00000573827 CELSR2Q9HCU4 2923 aa16.5■□□□□ 0.23
SMG6-214ENST00000573827 FAM95CA0A1B0GW59 222 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 FAM187AA6NFU0 413 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 CXorf49A8MYA2 514 aaPredicted RBP16.49■□□□□ 0.23
SMG6-214ENST00000573827 MAP2K7O14733 419 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 VPS4BO75351 444 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 CELA2AP08217 269 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 HIST1H2AGP0C0S8 130 aaPredicted RBP16.49■□□□□ 0.23
SMG6-214ENST00000573827 PRR35P0CG20 571 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 RNF224P0DH78 156 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 IL1RNP18510 177 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 HIST1H2ADP20671 130 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 MRPL49Q13405 166 aaKnown RBP16.49■□□□□ 0.23
SMG6-214ENST00000573827 CATSPEREQ5SY80 951 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 ASPGQ86U10 573 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 PALM2Q8IXS6 379 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 ZBED8Q8IZ13 594 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 IQCKQ8N0W5 287 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 ZADH2Q8N4Q0 377 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 CISD2Q8N5K1 135 aaKnown RBP16.49■□□□□ 0.23
SMG6-214ENST00000573827 TM9SF4Q92544 642 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 NEIL2Q969S2 332 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms