RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TBCEQ15813 527 aaPredicted RBP15.11■□□□□ 0.01
NUP88-207ENST00000573584 CARTPTQ16568 116 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 ZNF181Q2M3W8 571 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 STEAP3Q658P3 488 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 TUBA3EQ6PEY2 450 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 USP43Q70EL4 1123 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 FCRL1Q96LA6 429 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 DUSP26Q9BV47 211 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 ATP11BQ9Y2G3 1177 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 TESMINQ9Y4I5 508 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 CYP2A7P20853 494 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CSNK1DP48730 415 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 PTSQ03393 145 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 ACSM2AQ08AH3 577 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 DGKKQ5KSL6 1271 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 ACSM2BQ68CK6 577 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 TPRG1Q6ZUI0 275 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 SPPL2AQ8TCT8 520 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 GGHQ92820 318 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 DOHHQ9BU89 302 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 TMEM184CQ9NVA4 438 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 SPASTQ9UBP0 616 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 LOC100506127A0A0U1RQW1 187 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CLCA1A8K7I4 914 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 TNFRSF11BO00300 401 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 ZNF821O75541 412 aaPredicted RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 DLGAP3O95886 979 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 GGT2P36268 569 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 PFN3P60673 137 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 KIAA1841Q6NSI8 718 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 DNAJC22Q8N4W6 341 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 SCRN2Q96FV2 425 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 LYSMD1Q96S90 227 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 PRM3Q9NNZ6 103 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 PLCXD1Q9NUJ7 323 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 RUVBL1Q9Y265 456 aaKnown RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 PADI2Q9Y2J8 665 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 RBMX2Q9Y388 322 aaKnown RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 UGT2A1Q9Y4X1 527 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 GFYI3L273 518 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CDK1P06493 297 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CD22P20273 847 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 IDH2P48735 452 aaKnown RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 NUDT6P53370 316 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CSTF3Q12996 717 aaKnown RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 CCDC92Q53HC0 331 aaPredicted RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 TPRG1LQ5T0D9 272 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CPTPQ5TA50 214 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CCDC103Q8IW40 242 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 ZNF675Q8TD23 568 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 EFHD2Q96C19 240 aaPredicted RBP15.1■□□□□ 0.01
NUP88-207ENST00000573584 TMEM175Q9BSA9 504 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 CEP44Q9C0F1 390 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 LYVE1Q9Y5Y7 322 aa15.1■□□□□ 0.01
NUP88-207ENST00000573584 GABRR3A8MPY1 467 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 GREM1O60565 184 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 SH3BGRLO75368 114 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 LATS1O95835 1130 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 RPLP0P05388 317 aaKnown RBP15.09■□□□□ 0.01
NUP88-207ENST00000573584 RGNQ15493 299 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 BCL2A1Q16548 175 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 MLIPQ5VWP3 458 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 LIPJQ5W064 366 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 SLC46A3Q7Z3Q1 461 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 SLC5A8Q8N695 610 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 ARL14EPQ8N8R7 260 aaPredicted RBP15.09■□□□□ 0.01
NUP88-207ENST00000573584 VPS37AQ8NEZ2 397 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 OR52J3Q8NH60 311 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 ZNF461Q8TAF7 563 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 ADAMTS19Q8TE59 1207 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 STARD8Q92502 1023 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 MAGEB10Q96LZ2 347 aaPredicted RBP15.09■□□□□ 0.01
NUP88-207ENST00000573584 CLSTN3Q9BQT9 956 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 GPR83Q9NYM4 423 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 POU2F3Q9UKI9 436 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 CLEC4EQ9ULY5 219 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 DSCR3O14972 297 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 MPC1LP0DKB6 136 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 S100A5P33763 92 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 PCYT1AP49585 367 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 AP1S2P56377 157 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 PPIGQ13427 754 aaKnown RBP eCLIP15.09■□□□□ 0.012e-6■■■□□ 16.5
NUP88-207ENST00000573584 SOWAHCQ53LP3 525 aaPredicted RBP15.09■□□□□ 0.01
NUP88-207ENST00000573584 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.09■□□□□ 0.01
NUP88-207ENST00000573584 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 NAGSQ8N159 534 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 FAM83FQ8NEG4 500 aaPredicted RBP15.09■□□□□ 0.01
NUP88-207ENST00000573584 OR2AP1Q8NGE2 309 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 SPATA9Q9BWV2 254 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 CDADC1Q9BWV3 514 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 CHST8Q9H2A9 424 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 RAD18Q9NS91 495 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 NDUFAF4Q9P032 175 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 YIPF1Q9Y548 306 aa15.09■□□□□ 0.01
NUP88-207ENST00000573584 IGLV3-16A0A075B6K0 115 aa15.08■□□□□ 0
NUP88-207ENST00000573584 TMEM229AB2RXF0 380 aa15.08■□□□□ 0
NUP88-207ENST00000573584 GFRA2O00451 464 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SNPHO15079 494 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms