RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TDRD1Q9BXT4 1180 aaKnown RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 ZCCHC2Q9C0B9 1178 aaKnown RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 CHRNA10Q9GZZ6 450 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 UBTD1Q9HAC8 227 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 NT5MQ9NPB1 228 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ENAMQ9NRM1 1142 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ZNF180Q9UJW8 692 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 SAR1BQ9Y6B6 198 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 DUSP10Q9Y6W6 482 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 HEATR5AQ86XA9 2040 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 TRBV23-1A0A0A0MS06 115 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 OR2AG2A6NM03 316 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 NME2P1O60361 137 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SLC4A1P02730 911 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 POLBP06746 335 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 TUBBP07437 444 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SLC35G4P0C7Q5 338 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 GZMAP12544 262 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 CREB1P16220 341 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 UGT2B7P16662 529 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SRD5A1P18405 259 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 GPD1P21695 349 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 MCM3P25205 808 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ARNTP27540 789 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 EFNA3P52797 238 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 DCDC1P59894 354 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 VEZF1Q14119 521 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 CLEC12BQ2HXU8 276 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ERCC6LQ2NKX8 1250 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 FOXB2Q5VYV0 432 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 NAA35Q5VZE5 725 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ALKBH5Q6P6C2 394 aaKnown RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 B3GNT6Q6ZMB0 384 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 RFX8Q6ZV50 586 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 CRLF3Q8IUI8 442 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SCUBE1Q8IWY4 988 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 FAM71AQ8IYT1 594 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 HORMAD2Q8N7B1 307 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 OR52N2Q8NGI0 321 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 BRSK1Q8TDC3 778 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 NSMCE1Q8WV22 266 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ZNF653Q96CK0 615 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 LRRC46Q96FV0 321 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 RBM41Q96IZ5 413 aaKnown RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 ALS2CR12Q96Q35 445 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 OR2A14Q96R47 310 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 NPAS2Q99743 824 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 CNPY3Q9BT09 278 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SHARPINQ9H0F6 387 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 C12orf65Q9H3J6 166 aaKnown RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 TFB2MQ9H5Q4 396 aaKnown RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 PCDH9Q9HC56 1237 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ZNF304Q9HCX3 659 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 IL1RAPL1Q9NZN1 696 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 ZNF282Q9UDV7 671 aaPredicted RBP6.49□□□□□ -1.37
CHD3-213ENST00000571249 ACSL5Q9ULC5 683 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SNX12Q9UMY4 172 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 TFR2Q9UP52 801 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 SHOC2Q9UQ13 582 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
CHD3-213ENST00000571249 LOC102723996A0A087X1L8 192 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 HYKKA2RU49 373 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 GABRR3A8MPY1 467 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 GPR39O43194 453 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 RRP9O43818 475 aaKnown RBP6.48□□□□□ -1.37
CHD3-213ENST00000571249 MAFKO60675 156 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 SLC25A12O75746 678 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 GOSR1O95249 250 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 HEXBP07686 556 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 H2AFZP0C0S5 128 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 TMEM253P0C7T8 217 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 NAT2P11245 290 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 KRT3P12035 628 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 ITGA2P17301 1181 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 TCP1P17987 556 aaKnown RBP6.48□□□□□ -1.37
CHD3-213ENST00000571249 BMP5P22003 454 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 AIF1P55008 147 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 ATP5J2P56134 94 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 RPL26P61254 145 aaKnown RBP6.48□□□□□ -1.37
CHD3-213ENST00000571249 SLC7A5Q01650 507 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 DSC2Q02487 901 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 IFI16Q16666 785 aaKnown RBP6.48□□□□□ -1.37
CHD3-213ENST00000571249 CA9Q16790 459 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 MEP1AQ16819 746 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 ATP13A5Q4VNC0 1218 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 FAM209AQ5JX71 171 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 FNBP1LQ5T0N5 605 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 ZNF468Q5VIY5 522 aaPredicted RBP6.48□□□□□ -1.37
CHD3-213ENST00000571249 LIAT1Q6ZQX7 453 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 H2AFVQ71UI9 128 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 CREG2Q8IUH2 290 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 LIX1Q8N485 282 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 LRRC57Q8N9N7 239 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 POGLUT1Q8NBL1 392 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 OR52E1Q8NGJ3 308 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 VPS35Q96QK1 796 aa6.48□□□□□ -1.37
CHD3-213ENST00000571249 PIGQQ9BRB3 760 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms