RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PNPLA2Q96AD5 504 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TRAPPC9Q96Q05 1148 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 GPR87Q9BY21 358 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 RUBCNLQ9H714 662 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 PDE7BQ9NP56 450 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 MRPS30Q9NP92 439 aaKnown RBP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 C1GALT1Q9NS00 363 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ANKUB1A6NFN9 424 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ERGP11308 486 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 FGF5P12034 268 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 GFAPP14136 432 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 NELFEP18615 380 aaKnown RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 PTPN4P29074 926 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 SLC26A3P40879 764 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 GDF5P43026 501 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 HSPA7P48741 367 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 RPS18P62269 152 aaKnown RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 HSD11B2P80365 405 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ZIC1Q15915 447 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 DEFB110Q30KQ9 67 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 PTCHD3Q3KNS1 767 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 CAPN13Q6MZZ7 669 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 FIGLAQ6QHK4 219 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 IQCKQ8N0W5 287 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 C4orf33Q8N1A6 199 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 SNX31Q8N9S9 440 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 OR2L3Q8NG85 312 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 OR2A1Q8NGT9 310 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 MZB1Q8WU39 189 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 SLC41A2Q96JW4 573 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 GPR78Q96P69 363 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ROPN1BQ9BZX4 212 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ROPN1Q9HAT0 212 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ARGLU1Q9NWB6 273 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-205ENST00000571028 IRAK4Q9NWZ3 460 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 C2CD3Q4AC94 2353 aa12.74□□□□□ -0.37
CCDC40-205ENST00000571028 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 NRP2O60462 931 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 CCNT2O60583 730 aaKnown RBP12.73□□□□□ -0.37
CCDC40-205ENST00000571028 KERAO60938 352 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 WDR47O94967 919 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 RBP1P09455 135 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 COL6A2P12110 1019 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 CDKL1Q00532 357 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 TUBB3Q13509 450 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 PFKFB4Q16877 469 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
CCDC40-205ENST00000571028 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 TECRLQ5HYJ1 363 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 TMTC4Q5T4D3 741 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 ICE2Q659A1 982 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 THOC6Q86W42 341 aaKnown RBP12.73□□□□□ -0.37
CCDC40-205ENST00000571028 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
CCDC40-205ENST00000571028 Q8NA96 180 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 HMGCLL1Q8TB92 370 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 RHBDF1Q96CC6 855 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 ATOH8Q96SQ7 321 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 SLC6A20Q9NP91 592 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 INTS7Q9NVH2 962 aaKnown RBP12.73□□□□□ -0.37
CCDC40-205ENST00000571028 NUDT4Q9NZJ9 180 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 TMEM216Q9P0N5 145 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 XPR1Q9UBH6 696 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 RARRES3Q9UL19 164 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 SH2B3Q9UQQ2 575 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 SLC22A14Q9Y267 594 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
CCDC40-205ENST00000571028 A6NL46 340 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 SYCE1LA8MT33 242 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 TMEM150CB9EJG8 249 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 H7BY64 318 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
CCDC40-205ENST00000571028 TAPBPO15533 448 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 CBX6O95503 412 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 KRT4P19013 534 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 GRNP28799 593 aaKnown RBP12.72□□□□□ -0.37
CCDC40-205ENST00000571028 AGTR2P50052 363 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 PER3P56645 1201 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 FCRL6Q6DN72 434 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 SULT1C3Q6IMI6 304 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 C17orf64Q86WR6 236 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 PLD3Q8IV08 490 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 RIBC1Q8N443 379 aaPredicted RBP12.72□□□□□ -0.37
CCDC40-205ENST00000571028 D2HGDHQ8N465 521 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms