RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SLC26A3P40879 764 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 AVPR1BP47901 424 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 ITGA8P53708 1063 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 EMP2P54851 167 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 NAE1Q13564 534 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 FAM53BQ14153 422 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 PHKG1Q16816 387 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 TEDDM1Q5T9Z0 273 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 HECTD2Q5U5R9 776 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 FAM45BPQ6NSW5 357 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIBCHQ6NVY1 386 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 AGTRAPQ6RW13 159 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 Q6ZS92 163 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 C17orf64Q86WR6 236 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 AMER3Q8N944 861 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 FAM45AQ8TCE6 357 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 PPP4R1Q8TF05 950 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 SNRNP40Q96DI7 357 aaKnown RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 PWWP2AQ96N64 755 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 ATG10Q9H0Y0 220 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZBTB20Q9HC78 741 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 TCP11X1B4DZS4 312 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 NDC80O14777 642 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 PCDH17O14917 1159 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TTI1O43156 1089 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 FOXS1O43638 330 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TSPAN12O95859 305 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 STATHP02808 62 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 UQCRHP07919 91 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 CDH1P12830 882 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 FDXRP22570 491 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 GRK3P35626 688 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 AP1S2P56377 157 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 EEF1A2Q05639 463 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 MRPL49Q13405 166 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 ATG9BQ674R7 924 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 STEAP4Q687X5 459 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 FAAH2Q6GMR7 532 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 CAPN13Q6MZZ7 669 aaPredicted RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TRMT10BQ6PF06 316 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 VN1R4Q7Z5H5 301 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 CUZD1Q86UP6 607 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 KBTBD2Q8IY47 623 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 ARHGEF39Q8N4T4 335 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 CISD2Q8N5K1 135 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 C19orf60Q96EN9 201 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 CNDP1Q96KN2 507 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 WDR83Q9BRX9 315 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 HAUS8Q9BT25 410 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 SGPP1Q9BX95 441 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TRIM54Q9BYV2 358 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 FAM129AQ9BZQ8 928 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 PLAC1Q9HBJ0 212 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 RIC8BQ9NVN3 520 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 ARL15Q9NXU5 204 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 RNF14Q9UBS8 474 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 SH2B3Q9UQQ2 575 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 TEX264Q9Y6I9 313 aa11.73□□□□□ -0.53
CTDNEP1-205ENST00000570828 KCNE1BA0A087WTH5 132 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 BLACEA4D250 179 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 H0YIG0 161 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 NSA2O95478 260 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ENO2P09104 434 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 SLC35G6P0C7Q6 338 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 COX6A1P12074 109 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 BCL6P41182 706 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 GLRBP48167 497 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 CSNK1G2P78368 415 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 MAT1AQ00266 395 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 Q0VFX4 171 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 PDIA2Q13087 525 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 MFAP5Q13361 173 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 FRG1Q14331 258 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 NR6A1Q15406 480 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 SYT16Q17RD7 645 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 LCTLQ6UWM7 567 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ISLR2Q6UXK2 745 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ASPGQ86U10 573 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 CAMKVQ8NCB2 501 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 OR9A4Q8NGU2 314 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZCCHC10Q8TBK6 192 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 DNAJB14Q8TBM8 379 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms