RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TRADDQ15628 312 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FAM153CQ494X1 144 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 MARC1Q5VT66 337 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TXNDC8Q6A555 127 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 NADSYN1Q6IA69 706 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 C11orf88Q6PI97 169 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 SLC30A9Q6PML9 568 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 PRSS45Q7RTY3 260 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 KLHDC8BQ8IXV7 354 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CMTM8Q8IZV2 173 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 IQCKQ8N0W5 287 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF567Q8N184 647 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 RIBC1Q8N443 379 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ARL14EPQ8N8R7 260 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 MAB21L3Q8N8X9 362 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TDRD5Q8NAT2 981 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 GOT1L1Q8NHS2 421 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CCDC110Q8TBZ0 833 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ARNTL2Q8WYA1 636 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 IGSF8Q969P0 613 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 VPS33AQ96AX1 596 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 RMDN1Q96DB5 314 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 MMABQ96EY8 250 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 HS6ST2Q96MM7 605 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FCRL5Q96RD9 977 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ABHD1Q96SE0 405 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 IL12RB2Q99665 862 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TMEM109Q9BVC6 243 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ROPN1BQ9BZX4 212 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 SLC39A8Q9C0K1 460 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CDC42EP4Q9H3Q1 356 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 LRRC40Q9H9A6 602 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ROPN1Q9HAT0 212 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 DUSP22Q9NRW4 184 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 KCTD5Q9NXV2 234 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 GDE1Q9NZC3 331 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 OGFRQ9NZT2 677 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 SEPT10Q9P0V9 454 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FBXL17Q9UF56 701 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TESQ9UGI8 421 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 FAM153AQ9UHL3 310 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 RSPH14Q9UHP6 348 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 IPO11Q9UI26 975 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 DTX4Q9Y2E6 619 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CLDN16Q9Y5I7 305 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ZFP37Q9Y6Q3 630 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 NYNRINQ9P2P1 1898 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CHD5Q8TDI0 1954 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 LOC100509620A0A075B734 347 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 USP17L23D6RBM5 183 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 PRYO14603 147 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ALOX15BO15296 676 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 RIPK2O43353 540 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 PEX1O43933 1283 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CACNG3O60359 315 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 PRAMEF11O60813 436 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 AP2A1O95782 977 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 KLKB1P03952 638 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 APRTP07741 180 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ABCB1P08183 1280 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 NR2F6P10588 404 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SELLP14151 372 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ETS1P14921 441 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ATP6V1B1P15313 513 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 TMEM11P17152 192 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CD72P21854 359 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CA4P22748 312 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 MAGEA4P43358 317 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 MMP13P45452 471 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GEMP55040 296 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GNA12Q03113 381 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ILF2Q12905 390 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GAB1Q13480 694 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 OLIG2Q13516 323 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CDH18Q13634 790 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 LAMB3Q13751 1172 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 KCNC3Q14003 757 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 HIST2H2ACQ16777 129 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 KLHL38Q2WGJ6 581 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD16Q6P6B7 361 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 LRRC8BQ6P9F7 803 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF449Q6P9G9 518 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GLDNQ6ZMI3 551 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 PID1Q7Z2X4 250 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 TFAP2DQ7Z6R9 452 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 KRT222Q8N1A0 295 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 TEX26Q8N6G2 289 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 VN1R2Q8NFZ6 395 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GDPD5Q8WTR4 605 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SMG7Q92540 1137 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF707Q96C28 371 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 TMA16Q96EY4 203 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 MYEOVQ96EZ4 313 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 CELF6Q96J87 481 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 PRICKLE1Q96MT3 831 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SERPINB12Q96P63 405 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms