RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 A0A0A6YYC8 382 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 I3L1I5 382 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 GSTT1P30711 240 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SERPINF1P36955 418 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 FCHO2Q0JRZ9 810 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SRSF5Q13243 272 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 HKDC1Q2TB90 917 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CES3Q6UWW8 571 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 NDUFAF7Q7L592 441 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 DCXRQ7Z4W1 244 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 FAM86B1Q8N7N1 296 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CD300LFQ8TDQ1 290 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 AENQ8WTP8 325 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 TEFMQ96QE5 360 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 TWNKQ96RR1 684 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SMOQ99835 787 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 DHRS9Q9BPW9 319 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 APOL2Q9BQE5 337 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ZYG11BQ9C0D3 744 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TM7SF3Q9NS93 570 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 EBF1Q9UH73 591 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CES2O00748 559 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 HCRTO43612 131 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 NOS1APO75052 506 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 PAGE1O75459 146 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ANP32DO95626 131 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SNAP29O95721 258 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 COMTP21964 271 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 GRIA4P48058 902 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 RRADP55042 308 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CDR2Q01850 454 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 RASGEF1BQ0VAM2 473 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CLCA4Q14CN2 919 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 UBXN11Q5T124 520 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 H1FNTQ75WM6 255 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 ERASQ7Z444 233 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 SETD3Q86TU7 594 aaPredicted RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 NRROSQ86YC3 692 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 PHYKPLQ8IUZ5 450 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ITFG1Q8TB96 612 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 EGLN2Q96KS0 407 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 ZNF597Q96LX8 424 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 GFM1Q96RP9 751 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 LMF1Q96S06 567 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CDADC1Q9BWV3 514 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 C1QTNF3Q9BXJ4 246 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 TPSD1Q9BZJ3 242 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 CNOT11Q9UKZ1 510 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 HEBP2Q9Y5Z4 205 aa6.45□□□□□ -1.38
SMG1-217ENST00000569764 PDCD11Q14690 1871 aaKnown RBP6.45□□□□□ -1.38
SMG1-217ENST00000569764 PIEZO1Q92508 2521 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 A0A0A6YYK5 440 aaPredicted RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 LINC01387J3KSC0 135 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 EEF2KO00418 725 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 PIRO00625 290 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TO15178 435 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 SERPINI2O75830 405 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TUBBP07437 444 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TCP1P17987 556 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 NFKB1P19838 968 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 NCF2P19878 526 aaPredicted RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 SCTRP47872 440 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 EIF2B2P49770 351 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 ENTPD1P49961 510 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 RPS15P62841 145 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 ABRQ12979 859 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 ACOX1Q15067 660 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 SIX1Q15475 284 aaPredicted RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 SYTL3Q4VX76 610 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 RAB6CQ53S08 254 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 ZNF628Q5EBL2 1059 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TOR2AQ5JU69 321 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 ARMC12Q5T9G4 340 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 KIAA0895LQ68EN5 471 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 RAET1GQ6H3X3 334 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TTC27Q6P3X3 843 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 EIF3MQ7L2H7 374 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 ZNF438Q7Z4V0 828 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 RAB43Q86YS6 212 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 FNDC5Q8NAU1 212 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 OR8J2Q8NGG1 315 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 PTCD2Q8WV60 388 aaKnown RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 SKA2Q8WVK7 121 aaPredicted RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 IGSF8Q969P0 613 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 SAMD8Q96LT4 415 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 RAB6CQ9H0N0 254 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 GAREM1Q9H706 876 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 SACM1LQ9NTJ5 587 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 C20orf96Q9NUD7 363 aaPredicted RBP6.44□□□□□ -1.38
SMG1-217ENST00000569764 NDE1Q9NXR1 346 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TRPC4Q9UBN4 977 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 FZD4Q9ULV1 537 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 IFT52Q9Y366 437 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 STX16O14662 325 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 TULP3O75386 442 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 SLCO2B1O94956 709 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 OR4Q2P0C623 313 aa6.44□□□□□ -1.38
SMG1-217ENST00000569764 BMP2P12643 396 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms