RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RASGEF1BQ0VAM2 473 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 FAM174BQ3ZCQ3 159 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 XKR6Q5GH73 641 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 NPNTQ6UXI9 565 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SPRED1Q7Z699 444 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CADM2Q8N3J6 435 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 NAT16Q8N8M0 369 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 RAD9AQ99638 391 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PCYT1BQ9Y5K3 369 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SDHDO14521 159 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 DLX3O60479 287 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PRKCAP17252 672 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 INHBCP55103 352 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ACTA2P62736 377 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ACTG2P63267 376 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 LAMTOR4Q0VGL1 99 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 KCNC3Q14003 757 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 RCAN2Q14206 197 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 TMEM132BQ14DG7 1078 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 GTF2IRD2BQ6EKJ0 949 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 GTF2IRD2Q86UP8 949 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 NEIL3Q8TAT5 605 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 UTP4Q969X6 686 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF382Q96SR6 550 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 DERL2Q9GZP9 239 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 INPP5EQ9NRR6 644 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 C14orf166Q9Y224 244 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 hCG_1807616A0A1W2PRN6 198 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 UBXN7O94888 489 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CSF1P09603 554 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 RHOQP17081 205 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CDK2P24941 298 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 RRAS2P62070 204 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CTBP1Q13363 440 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CRB2Q5IJ48 1285 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 RAP1GAP2Q684P5 730 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 KIAA1324Q6UXG2 1013 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ZC3HC1Q86WB0 502 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SLC15A3Q8IY34 581 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF433Q8N7K0 673 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 LSMEM1Q8N8F7 131 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 OR51D1Q8NGF3 324 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 MFSD8Q8NHS3 518 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 ADAMTS14Q8WXS8 1223 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 AZIN2Q96A70 460 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 GPATCH2Q9NW75 528 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 TVP23BQ9NYZ1 205 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PGAP2Q9UHJ9 254 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 C2CD4BA6NLJ0 364 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 CLIC1O00299 241 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 GPR182O15218 404 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 OR1I1O60431 355 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PAX6P26367 422 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 MANFP55145 182 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 KLF1Q13351 362 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PTPN20Q4JDL3 420 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 KLHL26Q53HC5 615 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 DCAF12L1Q5VU92 463 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 PAPD4Q6PIY7 484 aaKnown RBP6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SKA3Q8IX90 412 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SCARB1Q8WTV0 552 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 SLC7A6Q92536 515 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 LGMNQ99538 433 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 UBIAD1Q9Y5Z9 338 aa6.92□□□□□ -1.3
CNOT1-216ENST00000569240 A0A1B0GVG6 124 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 IL1R1P14778 569 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 EPORP19235 508 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 OR1E1P30953 314 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BUD31P41223 144 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ETV4P43268 484 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ST3GAL3Q11203 375 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 NFIXQ14938 502 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GPR33Q49SQ1 333 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ARL14Q8N4G2 192 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TTLQ8NG68 377 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 MAPK15Q8TD08 544 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 DHRS4Q9BTZ2 278 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SYT4Q9H2B2 425 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ABCC6O95255 1503 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM170BA6NMN3 283 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM155AB1AL88 458 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 EBLN1P0CF75 366 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GGT1P19440 569 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ACVR2AP27037 513 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 UTS2BQ765I0 119 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM83AQ86UY5 434 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM156AQ8NDB6 213 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BRSK1Q8TDC3 778 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 KIAA1191Q96A73 305 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.91□□□□□ -1.35e-7■■□□□ 13.8
CNOT1-216ENST00000569240 ABRACLQ9P1F3 81 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ERVK-18Q9QC07 812 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BUD23O43709 281 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 RGS9O75916 674 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CRHBPP24387 322 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TAP2Q03519 686 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms