RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 CD70P32970 193 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 TGM4P49221 684 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 XKR6Q5GH73 641 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 COX20Q5RI15 118 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 STARD8Q92502 1023 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 NTMT1Q9BV86 223 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 TPT1P8Q9HAU6 139 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 EXOSC4Q9NPD3 245 aaKnown RBP16.55■□□□□ 0.24
VAC14-210ENST00000568548 FZD4Q9ULV1 537 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 SAMD4AQ9UPU9 718 aaKnown RBP16.55■□□□□ 0.24
VAC14-210ENST00000568548 DOCK6Q96HP0 2047 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 HIST1H2AGP0C0S8 130 aaPredicted RBP16.55■□□□□ 0.24
VAC14-210ENST00000568548 HIST1H2ADP20671 130 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 TGFBR2P37173 567 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 CDH12P55289 794 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 DAB2P98082 770 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 IRF8Q02556 426 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 DMC1Q14565 340 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 TIGD6Q17RP2 521 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 CRTC1Q6UUV9 634 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 CERS6Q6ZMG9 384 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 SLC5A8Q8N695 610 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 HIST1H2AHQ96KK5 128 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 DMRTB1Q96MA1 342 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 HIST1H2AJQ99878 128 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 NIPSNAP1Q9BPW8 284 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 H2AFJQ9BTM1 129 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 MTG2Q9H4K7 406 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 PLXNA3P51805 1871 aa16.55■□□□□ 0.24
VAC14-210ENST00000568548 M0R082 166 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 PREPP48147 710 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 PRMT2P55345 433 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 COPZ1P61923 177 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 CYP4F8P98187 520 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 AGAP7PQ5VUJ5 663 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 FRG2Q64ET8 278 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 AKAP14Q86UN6 197 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 LYSMD2Q8IV50 215 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 CRIPAKQ8N1N5 446 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 FRG2BQ96QU4 278 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 DDX28Q9NUL7 540 aaKnown RBP16.54■□□□□ 0.24
VAC14-210ENST00000568548 ERVK13-1Q9NX77 482 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 CCDC88CQ9P219 2028 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 E7EQ34 232 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 RGS5O15539 181 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 KCNK2O95069 426 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 LHCGRP22888 699 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 MC1RQ01726 317 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 MEF2AQ02078 507 aaPredicted RBP16.54■□□□□ 0.24
VAC14-210ENST00000568548 GAB1Q13480 694 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 DOC2BQ14184 412 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 SYT6Q5T7P8 510 aaPredicted RBP16.54■□□□□ 0.24
VAC14-210ENST00000568548 RSBN1Q5VWQ0 802 aaPredicted RBP16.54■□□□□ 0.24
VAC14-210ENST00000568548 UBE2J2Q8N2K1 259 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 RHOXF1Q8NHV9 184 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 ZDHHC6Q9H6R6 413 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 TRIM39Q9HCM9 518 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 NDRG4Q9ULP0 352 aaKnown RBP16.54■□□□□ 0.24
VAC14-210ENST00000568548 NAALAD2Q9Y3Q0 740 aa16.54■□□□□ 0.24
VAC14-210ENST00000568548 PLXNA4Q9HCM2 1894 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 GNG14A0A1W2PPG7 69 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 WNT9AO14904 365 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 MFN2O95140 757 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 PTHP01270 115 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 ADRA2AP08913 450 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 ETFAP13804 333 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 AMD1P17707 334 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 AOAHP28039 575 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 FEN1P39748 380 aaKnown RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 ACOX1Q15067 660 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 ZNF404Q494X3 552 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 CAPN13Q6MZZ7 669 aaPredicted RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 SCAIQ8N9R8 606 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 SPATA17Q96L03 361 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 TM9SF3Q9HD45 589 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 NECTIN3Q9NQS3 549 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 TRPS1Q9UHF7 1281 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 SNX6Q9UNH7 406 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 BOLA1Q9Y3E2 137 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 GBF1Q92538 1859 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 PNMA8CA0A1B0GUJ8 204 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 NRG2O14511 850 aaPredicted RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 HOXA2O43364 376 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 FPR1P21462 350 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 WNT3P56703 355 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 ELAVL2Q12926 359 aaKnown RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 TPRG1LQ5T0D9 272 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 SPOUT1Q5T280 376 aaKnown RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 LRIF1Q5T3J3 769 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 HMGN2P46Q86SG4 172 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 PLPP6Q8IY26 295 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 C1orf52Q8N6N3 182 aaKnown RBP16.53■□□□□ 0.24
VAC14-210ENST00000568548 ATL1Q8WXF7 558 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 NELL1Q92832 810 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 VMP1Q96GC9 406 aa16.53■□□□□ 0.24
VAC14-210ENST00000568548 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms