RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 NINQ8N4C6 2090 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CASP8AP2Q9UKL3 1982 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 MANSC4A6NHS7 340 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 FAM220BPB1ANY3 271 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 H3BN98 237 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 H7C4K7 107 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 EOMESO95936 686 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 HPRP00739 348 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 OR56A5P0C7T3 313 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 ITIH1P19827 911 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CLDN8P56748 225 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 B4GALNT1Q00973 533 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 OXA1LQ15070 435 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 SF3B4Q15427 424 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 KCNJ8Q15842 424 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 RPS26P11Q5JNZ5 115 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CPTPQ5TA50 214 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TNFAIP8L2Q6P589 184 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 SHQ1Q6PI26 577 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 DPY19L3Q6ZPD9 716 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 OTOP2Q7RTS6 562 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 ENTHD1Q8IYW4 607 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 LGI4Q8N135 537 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CELF5Q8N6W0 485 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 PCSK9Q8NBP7 692 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 GLB1L3Q8NCI6 653 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 OR10G2Q8NGC3 310 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 RAET1EQ8TD07 263 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CASD1Q96PB1 797 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 C1QTNF3Q9BXJ4 246 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 LINC00597Q9H2U6 94 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TRIT1Q9H3H1 467 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 ZNF334Q9HCZ1 680 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TMEM161AQ9NX61 479 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 RNF6Q9Y252 685 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 KNL1Q8NG31 2342 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TET1Q8NFU7 2136 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 M0QX08 132 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 WWP2O00308 870 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 C6orf47O95873 294 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 PTHP01270 115 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 FPR1P21462 350 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 HOXA9P31269 272 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 HOXD12P35452 270 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TUFMP49411 452 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 COPZ1P61923 177 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 RPS13P62277 151 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CCDC85BQ15834 202 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TSTQ16762 297 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 EXOC3L2Q2M3D2 409 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 PLEKHG7Q6ZR37 379 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 ZNF605Q86T29 641 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TCAIMQ8N3R3 496 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 AADATQ8N5Z0 425 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 WDR36Q8NI36 951 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 CNPPD1Q9BV87 410 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 PIKFYVEQ9Y2I7 2098 aa8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 TDRD15B5MCY1 1934 aaKnown RBP8.66□□□□□ -1.02
HDGFL3-206ENST00000568294 RTCAO00442 366 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 PLK4O00444 970 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 SLC22A1O15245 554 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 GABARAPO95166 117 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 KCNK5O95279 499 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 HMGA1P17096 107 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 JUNBP17275 347 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 GRK3P35626 688 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 NSG1P42857 185 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CSNK1DP48730 415 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 SLC35A2P78381 396 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 DOC2AQ14183 400 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 DUOXA1Q1HG43 343 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 INO80DQ53TQ3 878 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ARMCX4Q5H9R4 360 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TPRG1LQ5T0D9 272 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 STEAP3Q658P3 488 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ZZZ3Q8IYH5 903 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 HJURPQ8NCD3 748 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 OR6Q1Q8NGQ2 317 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 OTULINQ96BN8 352 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 VPS35Q96QK1 796 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 AKIP1Q9NQ31 210 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 DNAJC27Q9NZQ0 273 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 GPC6Q9Y625 555 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 HTR3EA5X5Y0 456 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TRIM64A6NGJ6 449 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 GFRA2O00451 464 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CTDSP2O14595 271 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 INPPL1O15357 1258 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 LRRTM2O43300 516 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TSPAN6O43657 245 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 NME6O75414 186 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 NPPAP01160 153 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms