RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KLK1P06870 262 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 HOXC4P09017 264 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 CTSEP14091 401 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PRPS1L1P21108 318 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 CXCR2P25025 360 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 OXTRP30559 389 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 VHLP40337 213 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 RABIFP47224 123 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 GSK3BP49841 420 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 PHC1P78364 1004 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 C1orf61Q13536 156 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SELPLGQ14242 412 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 TRIP10Q15642 601 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 GTDC1Q4AE62 458 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 COMMD6Q7Z4G1 85 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 LAS2Q8IYD9 372 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SYNPOQ8N3V7 929 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 WDR34Q96EX3 536 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 AURKBQ96GD4 344 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 REXO4Q9GZR2 422 aaKnown RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 RMND5AQ9H871 391 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 MRPS30Q9NP92 439 aaKnown RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 ICKQ9UPZ9 632 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 KLHL20Q9Y2M5 609 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.79□□□□□ -1.32
SMG1-215ENST00000568239 HEBP2Q9Y5Z4 205 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 HS3ST3A1Q9Y663 406 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 SLCO1B1Q9Y6L6 691 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 V9GYQ6 96 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 A0A0C4DFX4 3053 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 CACNA1IQ9P0X4 2223 aa6.79□□□□□ -1.32
SMG1-215ENST00000568239 C15orf38-AP3S2A0A0A6YYH1 394 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SERTM1A2A2V5 107 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CHURC1-FNTBB4DL54 471 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RTCAO00442 366 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 KDM1AO60341 852 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZNF217O75362 1048 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 NPPAP01160 153 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ERGP11308 486 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TIA1P31483 386 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMG1-215ENST00000568239 PRDX1Q06830 199 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 LPCAT4Q643R3 524 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RNF111Q6ZNA4 994 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ARPINQ7Z6K5 226 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TAF8Q7Z7C8 310 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 AMIGO1Q86WK6 493 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 FAM129CQ86XR2 697 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 DPP10Q8N608 796 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ANKRD53Q8N9V6 530 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 OR2A1Q8NGT9 310 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 OR10A6Q8NH74 314 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 OR10G6Q8NH81 332 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 WDR48Q8TAF3 677 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PATE1Q8WXA2 126 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PPWD1Q96BP3 646 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SLC6A18Q96N87 628 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 GBP5Q96PP8 586 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PANX1Q96RD7 426 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 INPP5KQ9BT40 448 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RAB11FIP5Q9BXF6 653 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SPHK1Q9NYA1 384 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZNF624Q9P2J8 865 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 SPASTQ9UBP0 616 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 C15orf41Q9Y2V0 281 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 MDC1Q14676 2089 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 SPEGQ15772 3267 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CABIN1Q9Y6J0 2220 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 IGHV1OR15-9A0A0B4J2B8 117 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 A0A0G2JN53 185 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 A0A1W2PPC4 97 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 FOXE1O00358 373 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 TNFRSF10CO14798 259 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 DCNP07585 359 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 ABCB1P08183 1280 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 F3P13726 295 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ATP6V1B2P21281 511 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PTX3P26022 381 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 GRK3P35626 688 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SLC19A1P41440 591 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RAE1P78406 368 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 TRAP1Q12931 704 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 COL9A2Q14055 689 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 TAF11Q15544 211 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 UGT8Q16880 541 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 GRAMD1BQ3KR37 738 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ABRAXAS1Q6UWZ7 409 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZNF621Q6ZSS3 439 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ABI3BPQ7Z7G0 1075 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TMEM132CQ8N3T6 1108 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 OR2L8Q8NGY9 312 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ITCHQ96J02 903 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ANKRD27Q96NW4 1050 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 F2RL3Q96RI0 385 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 MACROD1Q9BQ69 325 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 DPH7Q9BTV6 452 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms