RNA–Protein interactions for RNA: ENST00000567982.5

POLR2C-208, Transcript of RNA polymerase II subunit C, human

TSL 2

Gene POLR2C, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2C-208	ENST00000567982	ALDH4A1	P30038	563 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	GRK6	P43250	576 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	NOVA1	P51513	510 aa	Known RBP	11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	NEK2	P51955	445 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	GPLD1	P80108	840 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	RELA	Q04206	551 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	IFT88	Q13099	833 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	SLC14A1	Q13336	389 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	C10orf62	Q5T681	223 aa	Predicted RBP	11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	NKAIN2	Q5VXU1	208 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	FCRL6	Q6DN72	434 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	HIST2H2AA3	Q6FI13	130 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	ARMC6	Q6NXE6	501 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	GUSBP11	Q6P575	273 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	TMIGD1	Q6UXZ0	262 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	VN1R5	Q7Z5H4	357 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	SPRED1	Q7Z699	444 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	CACNA2D3	Q8IZS8	1091 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	KRT78	Q8N1N4	520 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	HUS1B	Q8NHY5	278 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	SELENOM	Q8WWX9	145 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	UBE2E3	Q969T4	207 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	ZUFSP	Q96AP4	578 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	REPS1	Q96D71	796 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	MTFMT	Q96DP5	389 aa	Known RBP	11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	PPM1M	Q96MI6	270 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	HBEGF	Q99075	208 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	AIF1L	Q9BQI0	150 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	PLCD4	Q9BRC7	762 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	CCDC28B	Q9BUN5	200 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	RHBG	Q9H310	441 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	TCF7L2	Q9NQB0	619 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	PFDN4	Q9NQP4	134 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	ANKMY1	Q9P2S6	941 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	AKAP13	Q12802	2813 aa		11.15	□□□□□ -0.62
POLR2C-208	ENST00000567982	ATP6AP2	A0A1C7CYW4	349 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	TRBC2	A0A5B9	178 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	CPED1	A4D0V7	1026 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	NPIPB8	E9PQR5	432 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SLC28A1	O00337	649 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	HAT1	O14929	419 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	FLRT2	O43155	660 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	RRP9	O43818	475 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	LCMT2	O60294	686 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	VPS4B	O75351	444 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	ATP6AP2	O75787	350 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	TBX6	O95947	436 aa	Predicted RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	C9	P02748	559 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	CD59	P13987	128 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	HSD3B1	P14060	373 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	PRPH2	P23942	346 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	HSD3B2	P26439	372 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	CD1C	P29017	333 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SCTR	P47872	440 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	CFHR1	Q03591	330 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	CSTF3	Q12996	717 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SQSTM1	Q13501	440 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	NAA25	Q14CX7	972 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	LSM12	Q3MHD2	195 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SGO1	Q5FBB7	561 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	PERM1	Q5SV97	790 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	ADCK2	Q7Z695	626 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	PLD3	Q8IV08	490 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	RNF175	Q8N4F7	328 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	GBP7	Q8N8V2	638 aa	Predicted RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	ANKRD53	Q8N9V6	530 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	NAT6	Q93015	286 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	EDEM2	Q9BV94	578 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	ACPT	Q9BZG2	426 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SEMA6C	Q9H3T2	930 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	AKTIP	Q9H8T0	292 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SYNPO2L	Q9H987	977 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	HEY2	Q9UBP5	337 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	PPT2	Q9UMR5	302 aa		11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	GCN1	Q92616	2671 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	SMG1	Q96Q15	3661 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	COL5A1	P20908	1838 aa	Predicted RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	DSP	P15924	2871 aa	Known RBP	11.14	□□□□□ -0.63
POLR2C-208	ENST00000567982	FEZF1	A0PJY2	475 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	MAGEB17	A8MXT2	336 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	TAF4	O00268	1085 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	FOXE1	O00358	373 aa	Predicted RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	LSM1	O15116	133 aa	Known RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	CASC3	O15234	703 aa	Known RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	CAPN5	O15484	640 aa	Predicted RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	RGS14	O43566	566 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	OR1F1	O43749	312 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	DUX1	O43812	170 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	KIF1C	O43896	1103 aa	Known RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	SNRNP200	O75643	2136 aa	Known RBP	11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	PCNA	P12004	261 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	PVR	P15151	417 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	ST6GAL1	P15907	406 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	SERPINB1	P30740	379 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	CSF2RB	P32927	897 aa		11.13	□□□□□ -0.63
POLR2C-208	ENST00000567982	GRK3	P35626	688 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms