RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 GALPQ9UBC7 116 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 DIDO1Q9BTC0 2240 aaKnown RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 H7BY64 318 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 FOXS1O43638 330 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 NRP2O60462 931 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 RASAL1O95294 804 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 CLDN1O95832 211 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 RNF224P0DH78 156 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 DCTP40126 519 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 MAGEA3P43357 314 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 TBPL1P62380 186 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 EXT1Q16394 746 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 MINDY4Q4G0A6 757 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 ANKRD22Q5VYY1 191 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 FAAH2Q6GMR7 532 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 ZC3H7AQ8IWR0 971 aaKnown RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 CPNE9Q8IYJ1 553 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 DTWD1Q8N5C7 304 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 SIRT6Q8N6T7 355 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 ATL1Q8WXF7 558 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 NR4A3Q92570 626 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 ZNF354BQ96LW1 612 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 PRAP1Q96NZ9 151 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 AARSD1Q9BTE6 412 aaKnown RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 PARVBQ9HBI1 364 aa17.63■□□□□ 0.41
LINC01238-205ENST00000567549 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 STOX2Q9P2F5 926 aaPredicted RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 CORO1CQ9ULV4 474 aaPredicted RBP17.63■□□□□ 0.41
LINC01238-205ENST00000567549 OR5H15A6NDH6 313 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 E2F3O00716 465 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 CDK2AP1O14519 115 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 AP1S2P56377 157 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 YBX1P67809 324 aaKnown RBP17.62■□□□□ 0.41
LINC01238-205ENST00000567549 HERC3Q15034 1050 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 ZRSR2Q15696 482 aaKnown RBP17.62■□□□□ 0.41
LINC01238-205ENST00000567549 HSP90AA5PQ58FG0 334 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 HIST2H2BCQ6DN03 193 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 CAPN13Q6MZZ7 669 aaPredicted RBP17.62■□□□□ 0.41
LINC01238-205ENST00000567549 CPEB2Q7Z5Q1 589 aaKnown RBP17.62■□□□□ 0.41
LINC01238-205ENST00000567549 LURAP1LQ8IV03 231 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 TMEM151BQ8IW70 566 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 HORMAD2Q8N7B1 307 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 GIMAP7Q8NHV1 300 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 STMN3Q9NZ72 180 aa17.62■□□□□ 0.41
LINC01238-205ENST00000567549 UTP20O75691 2785 aaKnown RBP17.62■□□□□ 0.41
LINC01238-205ENST00000567549 HNRNPRO43390 633 aaKnown RBP17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PRAMEF2O60811 474 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 XCR1P46094 333 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 TAS2R50P59544 299 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 ZNF33BQ06732 778 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PCOLCEQ15113 449 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 SPANXN3Q5MJ09 141 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PLAG1Q6DJT9 500 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 HIBCHQ6NVY1 386 aaPredicted RBP17.61■□□□□ 0.41
LINC01238-205ENST00000567549 TTC27Q6P3X3 843 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 ZNF549Q6P9A3 640 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 LCTLQ6UWM7 567 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 TMEM207Q6UWW9 146 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 GFRALQ6UXV0 394 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 CYHR1Q6ZMK1 362 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PIWIL4Q7Z3Z4 852 aaKnown RBP17.61■□□□□ 0.41
LINC01238-205ENST00000567549 ASPGQ86U10 573 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 LRRC56Q8IYG6 542 aaPredicted RBP17.61■□□□□ 0.41
LINC01238-205ENST00000567549 NAT8LQ8N9F0 302 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 CATSPER1Q8NEC5 780 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 OR51Q1Q8NH59 317 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 ACTRT1Q8TDG2 376 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 SLC13A3Q8WWT9 602 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PSMF1Q92530 271 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 OR1F2PQ96R84 312 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 SLC30A3Q99726 388 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 IARS2Q9NSE4 1012 aaKnown RBP17.61■□□□□ 0.41
LINC01238-205ENST00000567549 PCDHGB6Q9Y5F9 930 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 SLC22A7Q9Y694 548 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 CPAMD8Q8IZJ3 1885 aa17.61■□□□□ 0.41
LINC01238-205ENST00000567549 CACNA1DQ01668 2161 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 URADA6NGE7 173 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 CES2O00748 559 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 HAUS5O94927 633 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 JAK1P23458 1154 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 BCL6P41182 706 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 IL2P60568 153 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 ILF2Q12905 390 aaKnown RBP17.6■□□□□ 0.41
LINC01238-205ENST00000567549 PDAP1Q13442 181 aaKnown RBP17.6■□□□□ 0.41
LINC01238-205ENST00000567549 CRYMQ14894 314 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 BTBD16Q32M84 506 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 AGTRAPQ6RW13 159 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 GALNT7Q86SF2 657 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 ARHGEF39Q8N4T4 335 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 FAM98AQ8NCA5 519 aaKnown RBP17.6■□□□□ 0.41
LINC01238-205ENST00000567549 C2CD4AQ8NCU7 369 aaPredicted RBP17.6■□□□□ 0.41
LINC01238-205ENST00000567549 OR9A4Q8NGU2 314 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 RELTQ969Z4 430 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 SIGLEC10Q96LC7 697 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 IMMP1LQ96LU5 166 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 CYTH2Q99418 400 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 VN1R1Q9GZP7 353 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 ENTPD4Q9Y227 616 aa17.6■□□□□ 0.41
LINC01238-205ENST00000567549 TEX15Q9BXT5 2789 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms