RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ARHGEF18Q6ZSZ5 1173 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 KIF18BQ86Y91 864 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 LRRC49Q8IUZ0 686 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ADGRF3Q8IZF5 1079 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF567Q8N184 647 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 DNAJC22Q8N4W6 341 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 TMEM125Q96AQ2 219 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 RMDN2Q96LZ7 410 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 SPATA13Q96N96 652 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF700Q9H0M5 742 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 RAB17Q9H0T7 212 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ATG10Q9H0Y0 220 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ANKZF1Q9H8Y5 726 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 FEZ2Q9UHY8 353 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF281Q9Y2X9 895 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 SNX24Q9Y343 169 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 HRH3Q9Y5N1 445 aa9.16□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF407Q9C0G0 2248 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 MATN3O15232 486 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 SNRNP200O75643 2136 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 SLC25A12O75746 678 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 PRLP01236 227 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 POLBP06746 335 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 NFKB1P19838 968 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 PSMB4P28070 264 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 AKT1P31749 480 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 STIP1P31948 543 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 DSC2Q02487 901 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 FASTKQ14296 549 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 TRADDQ15628 312 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 P3H1Q32P28 736 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 ATP13A5Q4VNC0 1218 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 GLE1Q53GS7 698 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RNFT1Q5M7Z0 435 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 FNBP1LQ5T0N5 605 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 FCRLBQ6BAA4 426 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 PRMT9Q6P2P2 845 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF449Q6P9G9 518 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 SYDE1Q6ZW31 735 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 GSPT2Q8IYD1 628 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RASGEF1AQ8N9B8 481 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 OR52E1Q8NGJ3 308 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 OR2L2Q8NH16 312 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 MAML1Q92585 1016 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RNASE6Q93091 150 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 ERP44Q9BS26 406 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 TTYH2Q9BSA4 534 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 YIPF2Q9BWQ6 316 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 MVB12BQ9H7P6 319 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 KCNK13Q9HB14 408 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 YAE1D1Q9NRH1 226 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 C14orf105Q9NVL8 296 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RBM22Q9NW64 420 aaKnown RBP eCLIP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 PAK5Q9P286 719 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 SHOC2Q9UQ13 582 aa9.15□□□□□ -0.94
CAPN3-216ENST00000567071 UTP11Q9Y3A2 253 aaKnown RBP9.15□□□□□ -0.94
CAPN3-216ENST00000567071 UQCRHLA0A096LP55 91 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 A0A0G2JNJ9 132 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 C5orf60A6NFR6 353 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 GABRR3A8MPY1 467 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 PRPF4O43172 522 aaKnown RBP eCLIP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 NME2P1O60361 137 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ZNF189O75820 626 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 METTL18O95568 372 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 MSH3P20585 1137 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 FPR1P21462 350 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 NME2P22392 152 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 CD68P34810 354 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 SHMT2P34897 504 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 GCGRP47871 477 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ASCL1P50553 236 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 BASP1P80723 227 aaKnown RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 BTBD16Q32M84 506 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 TEX44Q53QW1 395 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ZC3H12BQ5HYM0 836 aaKnown RBP9.14□□□□□ -0.95
CAPN3-216ENST00000567071 DUPD1Q68J44 220 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ALG1LQ6GMV1 187 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ITPRIPL1Q6GPH6 555 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 ADGRD1Q6QNK2 874 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 PID1Q7Z2X4 250 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 CNTD1Q8N815 330 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 CREB3L4Q8TEY5 395 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 IFT81Q8WYA0 676 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 SNF8Q96H20 258 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 TEKT5Q96M29 485 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 VAT1Q99536 393 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 CCL19Q99731 98 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 HGH1Q9BTY7 390 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 GBA3Q9H227 469 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 XKR8Q9H6D3 395 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 Q9UFV3 132 aa9.14□□□□□ -0.95
CAPN3-216ENST00000567071 MTRF1LQ9UGC7 380 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms