RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TSPAN8P19075 237 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ITGAXP20702 1163 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 IMPDH1P20839 514 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 SLC18A1P54219 525 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 NAGLUP54802 743 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 CDH13P55290 713 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ITGA1P56199 1179 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ERVPABLB-1P60509 514 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ARF3P61204 181 aaPredicted RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 CLCQ05315 142 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 FOXM1Q08050 763 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 HYAL2Q12891 473 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 LCP2Q13094 533 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 CHIT1Q13231 466 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 IL11RAQ14626 422 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 HKDC1Q2TB90 917 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDH13-208ENST00000566333 GGTA1PQ4G0N0 100 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 XKR6Q5GH73 641 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 PWWP2BQ6NUJ5 590 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 FOXR1Q6PIV2 292 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ZCCHC23Q6ZST2 131 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 SYVN1Q86TM6 617 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 PPP1R3BQ86XI6 285 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 MCATQ8IVS2 390 aaKnown RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 L3MBTL4Q8NA19 623 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 CCDC63Q8NA47 563 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 MFSD9Q8NBP5 474 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 SLC38A9Q8NBW4 561 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 OR8K5Q8NH50 307 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 AGAP11Q8TF27 550 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 USP7Q93009 1102 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 TM4SF19Q96DZ7 209 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 CCDC126Q96EE4 140 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 PTCD3Q96EY7 689 aaKnown RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 SLC46A1Q96NT5 459 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 CDK15Q96Q40 435 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 TAAR9Q96RI9 348 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ZNF382Q96SR6 550 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 SELENOSQ9BQE4 189 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 AIF1LQ9BQI0 150 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 NTMT1Q9BV86 223 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 GATA5Q9BWX5 397 aaPredicted RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 SPRY4Q9C004 299 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 B3GNT4Q9C0J1 378 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 NOL11Q9H8H0 719 aaKnown RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 IPPKQ9H8X2 491 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 FANCEQ9HB96 536 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 MLXIPLQ9NP71 852 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 SEMA4BQ9NPR2 832 aaPredicted RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 AKAP7Q9P0M2 348 aaPredicted RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 ACSL6Q9UKU0 697 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ANGPTL2Q9UKU9 493 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 RARRES3Q9UL19 164 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ZNF490Q9ULM2 529 aaPredicted RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 MRPS2Q9Y399 296 aaKnown RBP7.8□□□□□ -1.16
CDH13-208ENST00000566333 PCDHGA7Q9Y5G6 932 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 ATMQ13315 3056 aa7.8□□□□□ -1.16
CDH13-208ENST00000566333 NBEAQ8NFP9 2946 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 PCSK5Q92824 1860 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 TEX51A0A1B0GUA7 166 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 HMGB1P1B2RPK0 211 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 DYNC1I1O14576 645 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 CLGNO14967 610 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 NVLO15381 856 aaKnown RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 UGDHO60701 494 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 KATNA1O75449 491 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 OR2B3O76000 313 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 SUPT7LO94864 414 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 CHRNGP07510 517 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 SLC5A2P31639 672 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 HPDP32754 393 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 RORAP35398 523 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 AHRP35869 848 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 CCNG1P51959 295 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 VSX2P58304 361 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 CYP4F2P78329 520 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 IRF8Q02556 426 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 TBC1D25Q3MII6 688 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 ZC3H12BQ5HYM0 836 aaKnown RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 DCAF12Q5T6F0 453 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 TMIGD1Q6UXZ0 262 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 CEACAM20Q6UY09 585 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 LAS2Q8IYD9 372 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 LSMEM2Q8N112 164 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
CDH13-208ENST00000566333 CSNK1A1LQ8N752 337 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 ANKRD42Q8N9B4 389 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 OR4F6Q8NGB9 312 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 WDR20Q8TBZ3 569 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 NT5CQ8TCD5 201 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 TRPC4APQ8TEL6 797 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 CREB3L4Q8TEY5 395 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
CDH13-208ENST00000566333 TEFMQ96QE5 360 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms