RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ATXN3P54252 364 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-213ENST00000565834 PPP1CAP62136 330 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 IRX1P78414 480 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-213ENST00000565834 RPS6KA2Q15349 733 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 ZNF438Q7Z4V0 828 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 VN1R5Q7Z5H4 357 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 YTHDF3Q7Z739 585 aaKnown RBP17.97■□□□□ 0.47
COMMD4-213ENST00000565834 SARGQ9BW04 601 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 AIG1Q9NVV5 245 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 PPT2Q9UMR5 302 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 POLR3HQ9Y535 204 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-213ENST00000565834 GPR179Q6PRD1 2367 aa17.97■□□□□ 0.47
COMMD4-213ENST00000565834 OR2A25A4D2G3 310 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 LCMT2O60294 686 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 PCDHGA12O60330 932 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 ETHE1O95571 254 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 BCL6P41182 706 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 GPR3P46089 330 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 DIO3P55073 304 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 CYP4F2P78329 520 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 NR0B2Q15466 257 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 PLA2G2CQ5R387 149 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 IL23RQ5VWK5 629 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 TCEAL6Q6IPX3 200 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 FIGLAQ6QHK4 219 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 MINDY1Q8N5J2 469 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 TCEAL3Q969E4 200 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 ZUFSPQ96AP4 578 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 APIPQ96GX9 242 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 APOLD1Q96LR9 279 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 SERPINI1Q99574 410 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 ABCG4Q9H172 646 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 ARL8BQ9NVJ2 186 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 EIF3LQ9Y262 564 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 KLK4Q9Y5K2 254 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 SIGLEC6O43699 453 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 SH3BGRLO75368 114 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 CBX6O95503 412 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 TGFB1P01137 390 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 MYF5P13349 255 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 EZRP15311 586 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 PIK3R1P27986 724 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 GSTM2P28161 218 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 LSSP48449 732 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 RPS15AP62244 130 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 BNIP1Q12981 228 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 KIAA0040Q15053 153 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 IRGCQ6NXR0 463 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 MIER2Q8N344 545 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 EID2Q8N6I1 236 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 FAM181AQ8N9Y4 354 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 OR6C4Q8NGE1 309 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 AHCYL2Q96HN2 611 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 METTL2AQ96IZ6 378 aaKnown RBP17.96■□□□□ 0.47
COMMD4-213ENST00000565834 PPM1MQ96MI6 270 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 BRINP2Q9C0B6 783 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 EPB41L1Q9H4G0 881 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 EVA1BQ9NVM1 165 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 TMED5Q9Y3A6 229 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 GPR45Q9Y5Y3 372 aa17.96■□□□□ 0.47
COMMD4-213ENST00000565834 ASXL3Q9C0F0 2248 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 RP1P56715 2156 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 PSMD12O00232 456 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-213ENST00000565834 HOXB3P14651 431 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-213ENST00000565834 PVRP15151 417 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 CDH3P22223 829 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 PTX3P26022 381 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-213ENST00000565834 MAPK1P28482 360 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 AHRP35869 848 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 OR1D5P58170 312 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 CYP4F3Q08477 520 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 ACSM2AQ08AH3 577 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 NR1D2Q14995 579 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 CACHD1Q5VU97 1274 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 ACSM2BQ68CK6 577 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 FCRL6Q6DN72 434 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 PARP9Q8IXQ6 854 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 MFSD9Q8NBP5 474 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 TUBB6Q9BUF5 446 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 ZMYND15Q9H091 742 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 KLHL25Q9H0H3 589 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 OR51B5Q9H339 312 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 SDR39U1Q9NRG7 319 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-213ENST00000565834 ASIC5Q9NY37 505 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 PCDHGA4Q9Y5G9 962 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 FRYLO94915 3013 aa17.95■□□□□ 0.46
COMMD4-213ENST00000565834 IGHV1OR21-1A0A087WYE8 117 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 CLEC3AO75596 197 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 MRPL19P49406 292 aaKnown RBP17.94■□□□□ 0.46
COMMD4-213ENST00000565834 SPIN4Q56A73 249 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 BAHD1Q8TBE0 780 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-213ENST00000565834 CCDC74AQ96AQ1 378 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 NSL1Q96IY1 281 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 MS4A8Q9BY19 250 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 MRPL1Q9BYD6 325 aaKnown RBP17.94■□□□□ 0.46
COMMD4-213ENST00000565834 RAB33BQ9H082 229 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 SEMA6CQ9H3T2 930 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 TXLNGQ9NUQ3 528 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 TAGLN3Q9UI15 199 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 AP1M2Q9Y6Q5 423 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms