RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 GPR33Q49SQ1 333 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 CCSMST1Q4G0I0 132 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 ACSBG2Q5FVE4 666 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 LDLRAP1Q5SW96 308 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 MROH9Q5TGP6 573 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 HECTD2Q5U5R9 776 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 PRAMEF13Q5VWM6 474 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 PDPK2PQ6A1A2 396 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 PAQR3Q6TCH7 311 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 PACS1Q6VY07 963 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SH2D5Q6ZV89 423 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 TRMT10CQ7L0Y3 403 aaKnown RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 TAF8Q7Z7C8 310 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 OTUD6BQ8N6M0 293 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 DENND6BQ8NEG7 585 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 GPR156Q8NFN8 814 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 MZB1Q8WU39 189 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 EEF1AKMT1Q8WVE0 214 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SLC44A1Q8WWI5 657 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 DLG3Q92796 817 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 KIAA1143Q96AT1 154 aaPredicted RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 DHRS1Q96LJ7 313 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 WDR92Q96MX6 357 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 ZIM3Q96PE6 472 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 RUFY1Q96T51 708 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 COPS8Q99627 209 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SPRY4Q9C004 299 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 CARS2Q9HA77 564 aaKnown RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SARS2Q9NP81 518 aaKnown RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 ACSS2Q9NR19 701 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 PHPT1Q9NRX4 125 aaPredicted RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SEMA3GQ9NS98 782 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 KLC4Q9NSK0 619 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SMOXQ9NWM0 555 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 EURLQ9NYK6 297 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 KLQ9UEF7 1012 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 TBK1Q9UHD2 729 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 SLC39A10Q9ULF5 831 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 CFAP20Q9Y6A4 193 aaKnown RBP5.94□□□□□ -1.46
UBFD1-204ENST00000565634 JMJD1CQ15652 2540 aa5.94□□□□□ -1.46
UBFD1-204ENST00000565634 A0A087WUV0 522 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLC5A10A0PJK1 596 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 H3BMM5 538 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GOLGA8RI6L899 631 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 CACNB4O00305 520 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 PRMT5O14744 637 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 PHGDHO43175 533 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SNX2O60749 519 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GPC4O75487 556 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLITRK5O94991 958 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 TSPAN12O95859 305 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 TNFP01375 233 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 IVLP07476 585 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GSTA2P09210 222 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 PKMP14618 531 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ZNF28P17035 718 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 MCM3P25205 808 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 NFKBIAP25963 317 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 CD1CP29017 333 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 CSTF2P33240 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 YBX1P67809 324 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ZNF844Q08AG5 666 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 LAMB3Q13751 1172 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ITGA9Q13797 1035 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLMAPQ14BN4 828 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ZRSR2Q15696 482 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 C18orf21Q32NC0 220 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 DCAF12Q5T6F0 453 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 METRNLQ641Q3 311 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLC6A19Q695T7 634 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 DUS1LQ6P1R4 473 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLC30A9Q6PML9 568 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 MACC1Q6ZN28 852 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SDCCAG8Q86SQ7 713 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 FJX1Q86VR8 437 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 C1QL4Q86Z23 238 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 TRAPPC5Q8IUR0 188 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 RBMXL3Q8N7X1 1067 aaKnown RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GPATCH11Q8N954 259 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 BVESQ8NE79 360 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 PEX13Q92968 403 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ARL8AQ96BM9 186 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 VPS39Q96JC1 886 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ELMO2Q96JJ3 720 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GPR78Q96P69 363 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 PAFAH2Q99487 392 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 GPR21Q99679 349 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 C19orf43Q9BQ61 176 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 CCM2Q9BSQ5 444 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 NAT9Q9BTE0 207 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 SLC25A23Q9BV35 468 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 C1QTNF7Q9BXJ2 289 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 FAM129AQ9BZQ8 928 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 TWSG1Q9GZX9 223 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 WWP1Q9H0M0 922 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 DPEP2Q9H4A9 486 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 AKAP7Q9P0M2 348 aaPredicted RBP5.93□□□□□ -1.46
UBFD1-204ENST00000565634 TAAR2Q9P1P5 351 aa5.93□□□□□ -1.46
UBFD1-204ENST00000565634 ZNF624Q9P2J8 865 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms