RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 A0A1B0GUH1 482 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 PABPN1LA6NDY0 278 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 AHSGP02765 367 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 C8orf89P0DMQ9 161 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 TCP1P17987 556 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 AGTR2P50052 363 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 TNFSF10P50591 281 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 AP1S2P56377 157 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 IL2P60568 153 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SKP1P63208 163 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 TIAL1Q01085 375 aaKnown RBP eCLIP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ILF2Q12905 390 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 FRG1Q14331 258 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 DUPD1Q68J44 220 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 CAPN13Q6MZZ7 669 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 TMEM214Q6NUQ4 689 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 PAQR3Q6TCH7 311 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 LCTLQ6UWM7 567 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 CPEB2Q7Z5Q1 589 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ZC3H7AQ8IWR0 971 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC34A3Q8N130 599 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 PDIK1LQ8N165 341 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 TBC1D19Q8N5T2 526 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 CATSPER1Q8NEC5 780 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ABHD11Q8NFV4 315 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 OR1N1Q8NGS0 311 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 OR51Q1Q8NH59 317 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 DNAJB8Q8NHS0 232 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SUN3Q8TAQ9 357 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 BRIX1Q8TDN6 353 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 LRRC39Q96DD0 335 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 PDLIM5Q96HC4 596 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SGPP1Q9BX95 441 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SYNPO2LQ9H987 977 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 CLK4Q9HAZ1 481 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ANKHQ9HCJ1 492 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ABCF3Q9NUQ8 709 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 PTGFRNQ9P2B2 879 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ASIC3Q9UHC3 531 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 VWA7Q9Y334 891 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC22A7Q9Y694 548 aa11.54□□□□□ -0.56
GTF3C1-204ENST00000564664 ZGRF1Q86YA3 2104 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 P2RX6O15547 441 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 NPPBP16860 134 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 GABRB3P28472 473 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 BCL6P41182 706 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 TBPL1P62380 186 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 MORF4L2Q15014 288 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 HERC3Q15034 1050 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 PCOLCEQ15113 449 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 KCTD19Q17RG1 926 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.561e-7■□□□□ 9.7
GTF3C1-204ENST00000564664 ABHD17BQ5VST6 288 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 PLAG1Q6DJT9 500 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 VN1R4Q7Z5H5 301 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 STRA8Q7Z7C7 330 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 ASPGQ86U10 573 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 MFSD9Q8NBP5 474 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 OR4K1Q8NGD4 311 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC13A3Q8WWT9 602 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 STMN3Q9NZ72 180 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 PCDHGB6Q9Y5F9 930 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 TEX15Q9BXT5 2789 aa11.53□□□□□ -0.56
GTF3C1-204ENST00000564664 SVILO95425 2214 aa11.52□□□□□ -0.56
GTF3C1-204ENST00000564664 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 E2F3O00716 465 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 CRYABP02511 175 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 UQCRHP07919 91 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 STSP08842 583 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 SLC35G6P0C7Q6 338 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 RNF224P0DH78 156 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 IVDP26440 423 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 CCR8P51685 355 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 EEF1A2Q05639 463 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 NAE1Q13564 534 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 PWP1Q13610 501 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 EXT1Q16394 746 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 TEDDM1Q5T9Z0 273 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 FAAH2Q6GMR7 532 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 PLD3Q8IV08 490 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 GPATCH11Q8N954 259 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 OR9A4Q8NGU2 314 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 OR56A3Q8NH54 315 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 M1APQ8TC57 530 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 LINGO1Q96FE5 620 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 CERS2Q96G23 380 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms