RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CELF2O95319 508 aaKnown RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 SLU7O95391 586 aaKnown RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 TPM1P09493 284 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 MYL6BP14649 208 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 CA6P23280 308 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 PPP2R1AP30153 589 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 CDH8P55286 799 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 HUNKP57058 714 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 GSDMDP57764 484 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 PLA2G7Q13093 441 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 PRKAA1Q13131 559 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 IRF3Q14653 427 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 NTRK2Q16620 822 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 CCDC152Q4G0S7 254 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 DNAJC21Q5F1R6 531 aaKnown RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 DCAF10Q5QP82 559 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 C1QTNF12Q5T7M4 302 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 GARNL3Q5VVW2 1013 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 ARMC3Q5W041 872 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 CHST9Q7L1S5 443 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 NIPA2Q8N8Q9 360 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 IQUBQ8NA54 791 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 SPC24Q8NBT2 197 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 NEK11Q8NG66 645 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 ELMOD3Q96FG2 381 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 RADILQ96JH8 1075 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 FOXN4Q96NZ1 517 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 DDOQ99489 341 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 SLA2Q9H6Q3 261 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 GIMAP4Q9NUV9 329 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 SETD4Q9NVD3 440 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 PSD3Q9NYI0 1048 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 ERAP1Q9NZ08 941 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 DBF4Q9UBU7 674 aaPredicted RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 CMAHPQ9Y471 501 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 SPIN1Q9Y657 262 aaPredicted RBP3.65□□□□□ -1.83
CHD9-212ENST00000564641 MYO3BQ8WXR4 1341 aa3.65□□□□□ -1.83
CHD9-212ENST00000564641 DDX60Q8IY21 1712 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 ANKRD36CQ5JPF3 1778 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 A0A1W2PQ09 198 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 RARGP13631 454 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 EIF2S2P20042 333 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 UGT1A4P22310 534 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 GATA2P23769 480 aaPredicted RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 SNRPEP62304 92 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 GRAPQ13588 217 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 RAPSNQ13702 412 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 PTPN14Q15678 1187 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 KYNUQ16719 465 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 HLA-BQ31612 363 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 C2CD6Q53TS8 623 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 TCP11X2Q5H9J9 407 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 SLC10A5Q5PT55 438 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 CCDC183Q5T5S1 534 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 CASC1Q6TDU7 716 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 FIP1L1Q6UN15 594 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 TEX11Q8IYF3 940 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 PRPF31Q8WWY3 499 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 NSMCE3Q96MG7 304 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 FAM210AQ96ND0 272 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 ZNF582Q96NG8 517 aaPredicted RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 GPATCH1Q9BRR8 931 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 ABHD6Q9BV23 337 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 FAM107BQ9H098 131 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 RSPH9Q9H1X1 276 aaPredicted RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 OR10A4Q9H209 315 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 RABEP2Q9H5N1 569 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 PDE7BQ9NP56 450 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 ZCCHC17Q9NP64 241 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 SLC35C2Q9NQQ7 365 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 FAM120CQ9NX05 1096 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 MRPL15Q9P015 296 aaKnown RBP3.64□□□□□ -1.83
CHD9-212ENST00000564641 LCMT1Q9UIC8 334 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 TP53TG3Q9ULZ0 132 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 CCDC171Q6TFL3 1326 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 ZNF541Q9H0D2 1346 aa3.64□□□□□ -1.83
CHD9-212ENST00000564641 A0A087WUV0 522 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 LOC101059948A0A1B0GTJ6 334 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ADAM20O43506 726 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 NEMFO60524 1076 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ENTPD3O75355 529 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 RB1P06400 928 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 APOA4P06727 396 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ACP2P11117 423 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 HSPA8P11142 646 aaKnown RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 GLULP15104 373 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 GABRB1P18505 474 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 MX1P20591 662 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 GCH1P30793 250 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 EPS15P42566 896 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 CAMPP49913 170 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 GMPSP49915 693 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 MNAT1P51948 309 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ELAVL2Q12926 359 aaKnown RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 BAATQ14032 418 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 PCLAFQ15004 111 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 C15orf59Q2T9L4 293 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 ASTE1Q2TB18 679 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 TAF1BQ53T94 588 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms