RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NVLO15381 856 aaKnown RBP11.92□□□□□ -0.5
KARS-204ENST00000564578 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 OR1F1O43749 312 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 ZNF28P17035 718 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 ARRB2P32121 409 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 GCGRP47871 477 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 SCTRP47872 440 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 VSX2P58304 361 aaPredicted RBP11.92□□□□□ -0.5
KARS-204ENST00000564578 RAB15P59190 212 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 ERVPABLB-1P60509 514 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 RPS15AP62244 130 aaKnown RBP11.92□□□□□ -0.5
KARS-204ENST00000564578 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
KARS-204ENST00000564578 DCAF12Q5T6F0 453 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 BPHLQ86WA6 291 aaPredicted RBP11.92□□□□□ -0.5
KARS-204ENST00000564578 ARHGEF39Q8N4T4 335 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 CCNYL1Q8N7R7 359 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 GOLGA6L1Q8N7Z2 621 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 L3MBTL4Q8NA19 623 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 TM4SF19Q96DZ7 209 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 MACROD1Q9BQ69 325 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 SELENOSQ9BQE4 189 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 AIF1LQ9BQI0 150 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 DDA1Q9BW61 102 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 TMEM121BQ9BXQ6 578 aaPredicted RBP11.92□□□□□ -0.5
KARS-204ENST00000564578 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 SERTAD3Q9UJW9 196 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 RARRES3Q9UL19 164 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 RNF11Q9Y3C5 154 aa11.92□□□□□ -0.5
KARS-204ENST00000564578 FITM1A5D6W6 292 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 P2RX6O15547 441 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 BRINP1O60477 761 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 UGDHO60701 494 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 OR2B3O76000 313 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 TBX6O95947 436 aaPredicted RBP11.91□□□□□ -0.5
KARS-204ENST00000564578 STATHP02808 62 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 GRK3P35626 688 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ITGA1P56199 1179 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 HKDC1Q2TB90 917 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 PRTGQ2VWP7 1150 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.91□□□□□ -0.5
KARS-204ENST00000564578 WASHC2DQ5SRD0 308 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 LIPJQ5W064 366 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 LETMD1Q6P1Q0 360 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 TMIGD1Q6UXZ0 262 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ZCCHC23Q6ZST2 131 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 FRMD7Q6ZUT3 714 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 VN1R5Q7Z5H4 357 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 MFSD9Q8NBP5 474 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 OR4F6Q8NGB9 312 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 OR8K5Q8NH50 307 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ACTR8Q9H981 624 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ANGPTL2Q9UKU9 493 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 AP1M2Q9Y6Q5 423 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 ACACAQ13085 2346 aa11.91□□□□□ -0.5
KARS-204ENST00000564578 WDR91A4D1P6 747 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 MED26O95402 600 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 CLDN9O95484 217 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
KARS-204ENST00000564578 SLC5A2P31639 672 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 HPDP32754 393 aaPredicted RBP11.9□□□□□ -0.5
KARS-204ENST00000564578 CCNG1P51959 295 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 LCP2Q13094 533 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 GRHL2Q6ISB3 625 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 CEACAM20Q6UY09 585 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 SYVN1Q86TM6 617 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 LSMEM2Q8N112 164 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 OR7G3Q8NG95 312 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 MDM1Q8TC05 714 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 CREB3L4Q8TEY5 395 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 N4BP2L2Q92802 583 aaPredicted RBP11.9□□□□□ -0.5
KARS-204ENST00000564578 GATA6Q92908 595 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 PITHD1Q9GZP4 211 aaPredicted RBP11.9□□□□□ -0.5
KARS-204ENST00000564578 NT5DC2Q9H857 520 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 ZFP69BQ9UJL9 534 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 PCDHGA7Q9Y5G6 932 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 AK5Q9Y6K8 562 aa11.9□□□□□ -0.5
KARS-204ENST00000564578 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
KARS-204ENST00000564578 SDK2Q58EX2 2172 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 LOC400499M0QZD8 3231 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 BIRC5O15392 142 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 ZNF749O43361 778 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 MLYCDO95822 493 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 OTCP00480 354 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 CAPNS1P04632 268 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 CXCR2P25025 360 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 AHRP35869 848 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 HNF4AP41235 474 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 HYAL2Q12891 473 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 CPSF6Q16630 551 aaKnown RBP eCLIP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms