RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 KIR3DP1A8MWS1 328 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 C3orf84H3BNL1 204 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 KPNA5O15131 536 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 FGF10O15520 208 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ATP6AP2O75787 350 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 CHRM5P08912 532 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 PBLDP30039 288 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 GNA15P30679 374 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ATP11AP98196 1134 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 FOXF2Q12947 444 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 PNOCQ13519 176 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 PDK1Q15118 436 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ZNF550Q7Z398 422 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ANKRD37Q7Z713 158 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 SCUBE1Q8IWY4 988 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ZNF525Q8N782 197 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 RASGEF1AQ8N9B8 481 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 FBF1Q8TES7 1133 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 SMAP2Q8WU79 429 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 FBXW5Q969U6 566 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 EID2BQ96D98 161 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 RSPO3Q9BXY4 272 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 PIGMQ9H3S5 423 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 IL1RL2Q9HB29 575 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ICKQ9UPZ9 632 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 FEZF1A0PJY2 475 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 KLHL33A6NCF5 533 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 FRG2CA6NGY1 282 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 M0QZ24 198 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 SMAD9O15198 467 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 ESR1P03372 595 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 PTPN6P29350 595 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 RFC1P35251 1148 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 AGTR2P50052 363 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 DIO3P55073 304 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 MAXP61244 160 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 FAPQ12884 760 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 WASHC2DQ5SRD0 308 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 FNBP1LQ5T0N5 605 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 ZNF658Q5TYW1 1059 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 PAPD4Q6PIY7 484 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 UNC5AQ6ZN44 842 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 GK5Q6ZS86 529 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 PASD1Q8IV76 773 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 SNX31Q8N9S9 440 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 ANKRD9Q96BM1 317 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 MVB12AQ96EY5 273 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 C10orf90Q96M02 699 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 CNPY3Q9BT09 278 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 GRIP2Q9C0E4 1043 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 TTC7AQ9ULT0 858 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 SCINQ9Y6U3 715 aa9.76□□□□□ -0.85
HDGFL3-204ENST00000563790 OR2AG2A6NM03 316 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 P4HA2O15460 535 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 SRPX2O60687 465 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 KRT5P13647 590 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 APEHP13798 732 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TPSB2P20231 275 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 UGT2B10P36537 528 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 CD79BP40259 229 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 SLC26A5P58743 744 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 LRRC63Q05C16 580 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TPSAB1Q15661 275 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TMEM220Q6QAJ8 160 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 ARCQ7LC44 396 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 ADGRE4PQ86SQ3 457 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TRIM59Q8IWR1 403 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 FMR1NBQ8N0W7 255 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 OR2L2Q8NH16 312 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 LILRB1Q8NHL6 650 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 UBE2FQ969M7 185 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 C11orf24Q96F05 449 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 CCT8L2Q96SF2 557 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 CCM2Q9BSQ5 444 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 MVB12BQ9H7P6 319 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 UGT1A8Q9HAW9 530 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 RAD18Q9NS91 495 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 GAR1Q9NY12 217 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TMEM59LQ9UK28 342 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 TRHDEQ9UKU6 1024 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 KLHL20Q9Y2M5 609 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 DUSP10Q9Y6W6 482 aa9.75□□□□□ -0.85
HDGFL3-204ENST00000563790 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 GPR37O15354 613 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 PEX11BO96011 259 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 PRLP01236 227 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 SHMT2P34897 504 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 USP8P40818 1118 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 GRIA3P42263 894 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 USP10Q14694 798 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 CDO1Q16878 200 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 GPSM1Q86YR5 675 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 TMEM156Q8N614 296 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 C9orf106Q8NAJ2 232 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms