RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MYH10P35580 1976 aa4.65□□□□□ -1.67
LINC00254-201ENST00000563416 VCANP13611 3396 aa4.65□□□□□ -1.67
LINC00254-201ENST00000563416 DOCK8Q8NF50 2099 aa4.65□□□□□ -1.67
LINC00254-201ENST00000563416 GREB1Q4ZG55 1949 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF638Q14966 1978 aaKnown RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 A0A087WWV3 80 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 A0A1W2PQF6 199 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ARHGEF35A5YM69 484 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 E9PMD0 336 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 TSPAN1O60635 241 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 YEATS4O95619 227 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 STAG3L1P0CL83 205 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 MYBL1P10243 752 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ITGA2P17301 1181 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 POLR2CP19387 275 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 HOXC13P31276 330 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 NAMPTP43490 491 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 SLC15A1P46059 708 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 NRIP1P48552 1158 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 SLC12A3P55017 1021 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 MBTD1Q05BQ5 628 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 GTF2H2Q13888 395 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 TFDP1Q14186 410 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 PCLAFQ15004 111 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 C15orf59Q2T9L4 293 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 PDSS1Q5T2R2 415 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 GKAP1Q5VSY0 366 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ATL3Q6DD88 541 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ADALQ6DHV7 355 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 GTF2H2CQ6P1K8 395 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF704Q6ZNC4 412 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 C1orf186Q6ZWK4 172 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 CCDC91Q7Z6B0 441 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 DNAJB7Q7Z6W7 309 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF329Q86UD4 541 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 DAW1Q8N136 415 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 TDRD5Q8NAT2 981 aaKnown RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 RNF149Q8NC42 400 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 LINC00301Q8NCQ3 95 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 DMBX1Q8NFW5 382 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 RSPH1Q8WYR4 309 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 KIFAP3Q92845 792 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 SAT2Q96F10 170 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 PPP1R13BQ96KQ4 1090 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 RAB3IPQ96QF0 476 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 CDX2Q99626 313 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 GPATCH1Q9BRR8 931 aaKnown RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 TIPINQ9BVW5 301 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 POLR3FQ9H1D9 316 aaPredicted RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM161AQ9NX61 479 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 STK39Q9UEW8 545 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 CNOT8Q9UFF9 292 aaKnown RBP4.64□□□□□ -1.67
LINC00254-201ENST00000563416 A0A0C4DFX4 3053 aa4.64□□□□□ -1.67
LINC00254-201ENST00000563416 MUC3AQ02505 3323 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 A0A087WYN8 130 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 KANSL1LA0AUZ9 987 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 EPOPA6NHQ4 379 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 C5orf67F2Z3F1 127 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 P2RY10O00398 339 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CTDSP2O14595 271 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DVL1O14640 695 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CAPN9O14815 690 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 KCNN4O15554 427 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ZNHIT1O43257 154 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 GRID2O43424 1007 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CSDE1O75534 798 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DAB1O75553 588 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 TGDSO95455 350 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 EDN1P05305 212 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PTMAP06454 111 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CCDC175P0C221 793 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 GABRB1P18505 474 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 AXLP30530 894 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CLK1P49759 484 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 LIG4P49917 911 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF131P52739 623 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DVL1P1P54792 670 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 MRPS34P82930 218 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 KARSQ15046 597 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 RBBP5Q15291 538 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 NAB2Q15742 525 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PNLIPRP3Q17RR3 467 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CDONQ4KMG0 1287 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CLLU1OSQ5K130 101 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 C18orf63Q68DL7 685 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 JADE1Q6IE81 842 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DENND5BQ6ZUT9 1274 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ASB18Q6ZVZ8 466 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 USP43Q70EL4 1123 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CATSPER4Q7RTX7 472 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DSG4Q86SJ6 1040 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 SMIM29Q86T20 159 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ECHDC2Q86YB7 292 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 LINC00346Q8IVM7 164 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 RNF168Q8IYW5 571 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 GOT1L1Q8NHS2 421 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 RAD54LQ92698 747 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 P2RX5Q93086 422 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 VPS33AQ96AX1 596 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms