RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PLRG1O43660 514 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CREG1O75629 220 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 KLHL18O94889 574 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 SCELO95171 688 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 FAM58BPP0C7Q3 252 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 PSMB5P28074 263 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CTHP32929 405 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 IGFALSP35858 605 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 TRPC1P48995 793 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 RPS21P63220 83 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 PON2Q15165 354 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 TMEM259Q4ZIN3 620 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 FAM98BQ52LJ0 330 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF385BQ569K4 471 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 MFSD2AQ8NA29 543 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 SETD7Q8WTS6 366 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 FAM120CQ9NX05 1096 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 TAC3Q9UHF0 121 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 AP3M1Q9Y2T2 418 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 COL4A2P08572 1712 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CLOCKO15516 846 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 RNGTTO60942 597 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 PRKD3O94806 890 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 SLC35G4P0C7Q5 338 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ENGP17813 658 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 IDSP22304 550 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ASMTP46597 345 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 HNRNPFP52597 415 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ADPRHP54922 357 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CHRNB3Q05901 458 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ABHD18Q0P651 414 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 HIST2H2ACQ16777 129 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 HIST2H2AA3Q6FI13 130 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 TMEM214Q6NUQ4 689 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 GALNT18Q6P9A2 607 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF621Q6ZSS3 439 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 MTSS1LQ765P7 747 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 FAM129CQ86XR2 697 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 TFAP2CQ92754 450 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 FAM131CQ96AQ9 280 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 REXO5Q96IC2 774 aaKnown RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 OSGEPL1Q9H4B0 414 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 PHPT1Q9NRX4 125 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CUEDC1Q9NWM3 386 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 KCNK6Q9Y257 313 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 DNMT3AQ9Y6K1 912 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-203ENST00000563226 PLXND1Q9Y4D7 1925 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 CLIC1O00299 241 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 SCAMP1O15126 338 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 DNTTP04053 509 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 TEAD1P28347 426 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 SGCGQ13326 291 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 CPTPQ5TA50 214 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 GPR155Q7Z3F1 870 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 CLEC4FQ8N1N0 589 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 PNPT1Q8TCS8 783 aaKnown RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 SLC47A1Q96FL8 570 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF639Q9UID6 485 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 PGM3O95394 542 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 SERPINA1P01009 418 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 CEACAM5P06731 702 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 GNAO1P09471 354 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 HOXB2P14652 356 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF23P17027 643 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 MTHFRP42898 656 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 MLF2Q15773 248 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 OR52E4Q8NGH9 312 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 OR10Q1Q8NGQ4 319 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 INSM2Q96T92 566 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 SORBS1Q9BX66 1292 aaKnown RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 UGT2B28Q9BY64 529 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 ANKRD60Q9BZ19 345 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 CD93Q9NPY3 652 aa18.37■□□□□ 0.53
SMPD3-203ENST00000563226 DCAF13Q9NV06 445 aaKnown RBP18.37■□□□□ 0.53
SMPD3-203ENST00000563226 HPCAL1P37235 193 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 PPP2CBP62714 309 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 PPP2CAP67775 309 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 MC1RQ01726 317 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF763Q0D2J5 394 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 LAPTM5Q13571 262 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 CYP2A13Q16696 494 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 TMIGD1Q6UXZ0 262 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 CAMKMTQ7Z624 323 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 MSLNLQ96KJ4 702 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 C12orf66Q96MD2 445 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 PRPF18Q99633 342 aaKnown RBP18.36■□□□□ 0.53
SMPD3-203ENST00000563226 HAUS8Q9BT25 410 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 BDH2Q9BUT1 245 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 TRIT1Q9H3H1 467 aaKnown RBP18.36■□□□□ 0.53
SMPD3-203ENST00000563226 ZNF696Q9H7X3 374 aa18.36■□□□□ 0.53
SMPD3-203ENST00000563226 MAGED1Q9Y5V3 778 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-203ENST00000563226 A0A1W2PPV9 198 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ANHXE9PGG2 379 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 PRSS23O95084 383 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 EPN2O95208 641 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TNFAIP8O95379 198 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBX6O95947 436 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms