RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 SLC25A51Q9H1U9 297 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RNF121Q9H920 327 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 NSMCE4AQ9NXX6 385 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 POLG2Q9UHN1 485 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 GMEB2Q9UKD1 530 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 HSPE1-MOB4S4R3N1 261 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ZNF254O75437 659 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 EEDO75530 441 aaKnown RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 FGBP02675 491 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ITGAMP11215 1152 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 LBPP18428 481 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 CRISP3P54108 245 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 PTPN5P54829 565 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 CXCR4P61073 352 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RGS1Q08116 209 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 NADSYN1Q6IA69 706 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 RDH10Q8IZV5 341 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 VWA5B2Q8N398 1253 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 OR5K1Q8NHB7 308 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 GPR151Q8TDV0 419 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 NCLNQ969V3 563 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 IMP4Q96G21 291 aaKnown RBP12.88□□□□□ -0.35
CLK3-206ENST00000562078 SLC22A4Q9H015 551 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 SMPD4Q9NXE4 827 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 ADGRE2Q9UHX3 823 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 KLHL21Q9UJP4 597 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 GMPPBQ9Y5P6 360 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 GPR45Q9Y5Y3 372 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 V9GYH0 126 aa12.88□□□□□ -0.35
CLK3-206ENST00000562078 SLC38A8A6NNN8 435 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 ANKRD28O15084 1053 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 RAMP2O60895 175 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 IFNA16P05015 189 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 FHP07954 510 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 GGT1P19440 569 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 SOX6P35712 828 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 HMGCLP35914 325 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 SLC1A2P43004 574 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 KCNC1P48547 511 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 KCNQ1P51787 676 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 AANATQ16613 207 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 RBM20Q5T481 1227 aaKnown RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 CAPN13Q6MZZ7 669 aaPredicted RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 GLCCI1Q86VQ1 547 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 ISG20Q96AZ6 181 aaKnown RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 SIGLEC11Q96RL6 698 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 CCNB1IP1Q9NPC3 277 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 STOML2Q9UJZ1 356 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 OBSL1O75147 1896 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 LAG3P18627 525 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 KELP23276 732 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■□□□ 12.2
CLK3-206ENST00000562078 OR1E1P30953 314 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 TIE1P35590 1138 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 ACVRL1P37023 503 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 RIN1Q13671 783 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 IHHQ14623 411 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 GRM7Q14831 915 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 ZNF678Q5SXM1 525 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 CCDC117Q8IWD4 279 aaPredicted RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 CNTN4Q8IWV2 1026 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 OR10Q1Q8NGQ4 319 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 EXT2Q93063 718 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 CCDC126Q96EE4 140 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 PPA2Q9H2U2 334 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 SERHL2Q9H4I8 314 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 AMBNQ9NP70 447 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 MID1IP1Q9NPA3 183 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 TREX1Q9NSU2 369 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
CLK3-206ENST00000562078 LEF1Q9UJU2 399 aaPredicted RBP12.87□□□□□ -0.35
CLK3-206ENST00000562078 KIAA0513O60268 411 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 GJB3O75712 270 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
CLK3-206ENST00000562078 MMP2P08253 660 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 SYN1P17600 705 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 KIR2DL3P43628 341 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 NRIP1P48552 1158 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 PER3P56645 1201 aa12.86□□□□□ -0.35
CLK3-206ENST00000562078 TATDN3Q17R31 274 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms