RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MAGEA12P43365 314 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 KRT6CP48668 564 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 EMP3P54852 163 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 HERVK_113P63132 956 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CYP4F2P78329 520 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CSNK1G2P78368 415 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 DLG1Q12959 904 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 DDX39BQ13838 428 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 IMPG1Q17R60 797 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 AP5B1Q2VPB7 878 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 FBXO48Q5FWF7 155 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CATSPEREQ5SY80 951 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 FCRL6Q6DN72 434 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 FBXO42Q6P3S6 717 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 RNF44Q7L0R7 432 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 RAB43Q86YS6 212 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 PLD3Q8IV08 490 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 NUDCD3Q8IVD9 361 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 PLD6Q8N2A8 252 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 C7orf57Q8NEG2 295 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 METTL21AQ8WXB1 218 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 GATA6Q92908 595 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 ESAMQ96AP7 390 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 MVB12AQ96EY5 273 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 LRFN5Q96NI6 719 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 QRFPRQ96P65 431 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 NRTNQ99748 197 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 ERVK-6Q9BXR3 956 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 NT5DC2Q9H857 520 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 NOL11Q9H8H0 719 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 FAM60AQ9NP50 221 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 SEMA4BQ9NPR2 832 aaPredicted RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 STARD5Q9NSY2 213 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CUEDC1Q9NWM3 386 aaPredicted RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 SIDT1Q9NXL6 827 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 FOXJ2Q9P0K8 574 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 TMEM216Q9P0N5 145 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 MRPS33Q9Y291 106 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 RAXQ9Y2V3 346 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 TMEM184BQ9Y519 407 aaPredicted RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 KLK4Q9Y5K2 254 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CABIN1Q9Y6J0 2220 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 KNL1Q8NG31 2342 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 EIF4E1BA6NMX2 242 aaKnown RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 TK2O00142 265 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TM9SF1O15321 606 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TAPBPO15533 448 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 KLHL41O60662 606 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TRIM13O60858 407 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 GUCY1B2O75343 617 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 MYO1DO94832 1006 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 PTX3P26022 381 aaPredicted RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 ALDH3A1P30838 453 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TLX1P31314 330 aaPredicted RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 EIF2S3P41091 472 aaKnown RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 SLC6A12P48065 614 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 MEF2AQ02078 507 aaPredicted RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZNF844Q08AG5 666 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 DNASE1L3Q13609 305 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 DOC2AQ14183 400 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TBCCQ15814 346 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZIC1Q15915 447 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 CPSF6Q16630 551 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPM1-229ENST00000561242 NKAIN1Q4KMZ8 207 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 BEND6Q5SZJ8 279 aaPredicted RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 UBAP2Q5T6F2 1119 aaKnown RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZNF425Q6IV72 752 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 RHBDD2Q6NTF9 364 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 GOLGA7Q7Z5G4 137 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TRABD2AQ86V40 505 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 BMPERQ8N8U9 685 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZCCHC10Q8TBK6 192 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TRPC4APQ8TEL6 797 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 UBTD2Q8WUN7 234 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 MIEF2Q96C03 454 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 CMTM7Q96FZ5 175 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 PGM2Q96G03 612 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 IP6K3Q96PC2 410 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 TWSG1Q9GZX9 223 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 WDR41Q9HAD4 459 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ASCL3Q9NQ33 180 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZNF358Q9NW07 568 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 DHCR7Q9UBM7 475 aaKnown RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 TRPC4Q9UBN4 977 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ZNF282Q9UDV7 671 aaPredicted RBP10.23□□□□□ -0.77
TPM1-229ENST00000561242 ACSL6Q9UKU0 697 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 ACTL7BQ9Y614 415 aa10.23□□□□□ -0.77
TPM1-229ENST00000561242 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 LOC105369274A0A096LPK9 316 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 LOC102723532A0A0G2JNH3 316 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 CLDN4O14493 209 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 DYRK3O43781 588 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 B3GALT2O43825 422 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CLEC3AO75596 197 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 WISP3O95389 354 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 HEXBP07686 556 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SERPINA6P08185 405 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 RAB40ALP0C0E4 278 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms