RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RBBP4Q09028 425 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF763Q0D2J5 394 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 KCNAB2Q13303 367 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 PDE7AQ13946 482 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 GRIN2CQ14957 1233 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 SKIV2LQ15477 1246 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TEAD4Q15561 434 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 CCSMST1Q4G0I0 132 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TCEAL5Q5H9L2 206 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 CPTPQ5TA50 214 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 OR2T5Q6IEZ7 315 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 SPESP1Q6UW49 350 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 LCTLQ6UWM7 567 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ADAMTSL4Q6UY14 1074 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM26Q6ZUK4 368 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 IKBIPQ70UQ0 350 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ERN2Q76MJ5 926 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF551Q7Z340 670 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 PTOV1Q86YD1 416 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 LRRC56Q8IYG6 542 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 CHPFQ8IZ52 775 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 OFCC1Q8IZS5 231 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 C1orf52Q8N6N3 182 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ARL10Q8N8L6 244 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 OR2T29Q8NH02 315 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 OR2L2Q8NH16 312 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 FBLIM1Q8WUP2 373 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MYLIPQ8WY64 445 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 BADQ92934 168 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF566Q969W8 418 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TMIGD2Q96BF3 282 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ISOC1Q96CN7 298 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MUS81Q96NY9 551 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 LRRC3BQ96PB8 259 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MBOAT4Q96T53 435 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MTERF1Q99551 399 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 WRAP53Q9BUR4 548 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 EBPLQ9BY08 206 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 CHST8Q9H2A9 424 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MTG2Q9H4K7 406 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MYNNQ9NPC7 610 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 IL1RAPQ9NPH3 570 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 DYRK4Q9NR20 520 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 VPS4AQ9UN37 437 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 WBP11Q9Y2W2 641 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 HCFC2Q9Y5Z7 792 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 GABRR3A8MPY1 467 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PRRT4C9JH25 899 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PCDH7O60245 1069 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 MRPS14O60783 128 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TBX19O60806 448 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NOL3O60936 208 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 E2F6O75461 281 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SEC24DO94855 1032 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 FKBP9O95302 570 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RPN2P04844 631 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 FABP3P05413 133 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 GSNP06396 782 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CCDC159P0C7I6 412 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ERGP11308 486 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NPPBP16860 134 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DDX5P17844 614 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 KELP23276 732 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CRHBPP24387 322 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PTX3P26022 381 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 GSTM2P28161 218 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ACADLP28330 430 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PDHA2P29803 388 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SERPINB1P30740 379 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DNAJA1P31689 397 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 EIF2DP41214 584 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 GSTM5P46439 218 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TPD52P55327 224 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ITGA1P56199 1179 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RPS13P62277 151 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 FCHO2Q0JRZ9 810 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SLC14A1Q13336 389 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DDX39BQ13838 428 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 KEAP1Q14145 624 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SLBPQ14493 270 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF234Q14588 700 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RAB39AQ14964 217 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ARHGAP19Q14CB8 494 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 AGERQ15109 404 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZIK1Q3SY52 487 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 C6orf141Q5SZD1 244 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF691Q5VV52 312 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RAET1GQ6H3X3 334 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZCCHC8Q6NZY4 707 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NXPE4Q6UWF7 544 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 XKR5Q6UX68 686 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF621Q6ZSS3 439 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TMPRSS11BQ86T26 416 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms