RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TWSG1Q9GZX9 223 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 PCED1AQ9H1Q7 454 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 KCNH6Q9H252 994 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 OR51B5Q9H339 312 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 SERHLQ9NQF3 203 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
USP3-213ENST00000559711 GMPR2Q9P2T1 348 aaKnown RBP12.19□□□□□ -0.46
USP3-213ENST00000559711 TRBV5-3A0A0A0MS03 114 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 IGKV1-8A0A0C4DH67 115 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 DNAJA2O60884 412 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 SH3BGRLO75368 114 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 TBX6O95947 436 aaPredicted RBP12.18□□□□□ -0.46
USP3-213ENST00000559711 C8BP07358 591 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 THEGLP0DJG4 465 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 SLC19A1P41440 591 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 GSK3BP49841 420 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 LIPEQ05469 1076 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 ILF3Q12906 894 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP3-213ENST00000559711 FZD2Q14332 565 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 SF1Q15637 639 aaKnown RBP12.18□□□□□ -0.46
USP3-213ENST00000559711 FXNQ16595 210 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 UGT8Q16880 541 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 LRIF1Q5T3J3 769 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 COMMD6Q7Z4G1 85 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 DHFR2Q86XF0 187 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
USP3-213ENST00000559711 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
USP3-213ENST00000559711 OR8J2Q8NGG1 315 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 DUS3LQ96G46 650 aaKnown RBP12.18□□□□□ -0.46
USP3-213ENST00000559711 ITCHQ96J02 903 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 PPM1MQ96MI6 270 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 ANKRD27Q96NW4 1050 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 MUC13Q9H3R2 512 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 ALG2Q9H553 416 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 VAPAQ9P0L0 249 aa12.18□□□□□ -0.46
USP3-213ENST00000559711 A0A096LPI6 279 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 TCRBV3S1A0A5B6 114 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 ANKDD1BA6NHY2 528 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 METTL12A8MUP2 240 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PCDH7O60245 1069 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 DFNA5O60443 496 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 SCN2BO60939 215 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 KLHL18O94889 574 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 SEMA3DO95025 777 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 LRATO95237 230 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 BAG2O95816 211 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 HOXB9P17482 250 aaPredicted RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 HTR1EP28566 365 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PTPN6P29350 595 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PEBP1P30086 187 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 SHMT2P34897 504 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 VHLP40337 213 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 KIR3DL1P43629 444 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 SESN3P58005 492 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 MRPS22P82650 360 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 RHDQ02161 417 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PGS1Q32NB8 556 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 RUNDC3AQ59EK9 446 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 WLSQ5T9L3 541 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 IYDQ6PHW0 289 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 LRRC74BQ6ZQY2 392 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 GPR180Q86V85 440 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 AMIGO1Q86WK6 493 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 DCP2Q8IU60 420 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 MSRB3Q8IXL7 192 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PHACTR4Q8IZ21 702 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 CAMKK1Q8N5S9 505 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 GPR156Q8NFN8 814 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 CADM4Q8NFZ8 388 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 GFM2Q969S9 779 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 CXorf40BQ96DE9 158 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 MS4A8Q9BY19 250 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 TRIM8Q9BZR9 551 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PAIP1Q9H074 479 aaKnown RBP12.17□□□□□ -0.46
USP3-213ENST00000559711 TBC1D17Q9HA65 648 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 TMEM184CQ9NVA4 438 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 SLC25A37Q9NYZ2 338 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 KLF15Q9UIH9 416 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 AP3M1Q9Y2T2 418 aa12.17□□□□□ -0.46
USP3-213ENST00000559711 AQP12BA6NM10 295 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SCAMP2O15127 329 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 AKAP10O43572 662 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 STAMBPO95630 424 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 HRH2P25021 359 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 CD27P26842 260 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 RPS9P46781 194 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 TRPC1P48995 793 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 WNT3P56703 355 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 ZNF763Q0D2J5 394 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SELPLGQ14242 412 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 LCN8Q6JVE9 175 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms