RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 IL11RAQ14626 422 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 TCHHL1Q5QJ38 904 aaPredicted RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 WASHC2DQ5SRD0 308 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 TMTC4Q5T4D3 741 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 DCAF12Q5T6F0 453 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 LETMD1Q6P1Q0 360 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 PPP1R3BQ86XI6 285 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 DTX1Q86Y01 620 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 LSMEM2Q8N112 164 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 METTL27Q8N6F8 245 aaPredicted RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 MFSD9Q8NBP5 474 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 KCT2Q8NC54 265 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 GALNT6Q8NCL4 622 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 OR6Y1Q8NGX8 325 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CREB3L4Q8TEY5 395 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 SMC6Q96SB8 1091 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 SELENOSQ9BQE4 189 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 GATA5Q9BWX5 397 aaPredicted RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 ERVK-6Q9BXR3 956 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 NOL11Q9H8H0 719 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 IPPKQ9H8X2 491 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CNOT10Q9H9A5 744 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 OXSMQ9NWU1 459 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 GPRC5BQ9NZH0 403 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 DHCR7Q9UBM7 475 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 ACSL6Q9UKU0 697 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 KCNE2Q9Y6J6 123 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 ZSCAN9O15535 394 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 FOXS1O43638 330 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 OR1F1O43749 312 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 KATNA1O75449 491 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CAPN1P07384 714 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 MYL2P10916 166 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CPA3P15088 417 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 GNAZP19086 355 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 IMPDH1P20839 514 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 F8A1P23610 371 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 RBMS1P29558 406 aaKnown RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 CASP2P42575 452 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CCT5P48643 541 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 EFNA3P52797 238 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 FOXA1P55317 472 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 ITGA1P56199 1179 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 RAB15P59190 212 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CLN3Q13286 438 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CCDC153Q494R4 210 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 XKR6Q5GH73 641 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 C1orf189Q5VU69 101 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 FAM199XQ6PEV8 388 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 ZNF517Q6ZMY9 492 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 ZCCHC23Q6ZST2 131 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 HDXQ7Z353 690 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 SYVN1Q86TM6 617 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 VASH2Q86V25 355 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 PDSS2Q86YH6 399 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 CSNK1A1LQ8N752 337 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 TRPC4APQ8TEL6 797 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 KCNA7Q96RP8 456 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 ULBP3Q9BZM4 244 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 KLHL31Q9H511 634 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 ZNF395Q9H8N7 513 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 VIPAS39Q9H9C1 493 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 SSU72Q9NP77 194 aaKnown RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
TPM1-217ENST00000559108 DKK4Q9UBT3 224 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 RAXQ9Y2V3 346 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 SEC16AO15027 2179 aa10.39□□□□□ -0.75
TPM1-217ENST00000559108 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 FFAR3O14843 346 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 GPR42O15529 346 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM1-217ENST00000559108 EFSO43281 561 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 OR4F21O95013 312 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ETHE1O95571 254 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 BPGMP07738 259 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 EPB42P16452 691 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 HNRNPH1P31943 449 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 SERPINB4P48594 390 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 HTR6P50406 440 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 NAGLUP54802 743 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 RPS15AP62244 130 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 IRF8Q02556 426 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 CLCQ05315 142 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 SLC9A5Q14940 896 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 TBCCQ15814 346 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ZC3H12BQ5HYM0 836 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 AGBL2Q5U5Z8 902 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 GRHL2Q6ISB3 625 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 FAM198BQ6UWH4 519 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ASPGQ86U10 573 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 TMEM126BQ8IUX1 230 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 LAS2Q8IYD9 372 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 L3MBTL4Q8NA19 623 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 OR4F6Q8NGB9 312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms