RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 RHBGQ9H310 441 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 PFDN4Q9NQP4 134 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 SLC9B1P1A6NJY1 282 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 SDHDO14521 159 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 NDUFAB1O14561 156 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 OR1F1O43749 312 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 DIAPH2O60879 1101 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 CTSVO60911 334 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 CPNE6O95741 557 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 HOXB3P14651 431 aaPredicted RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 BCL6P41182 706 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 PIK3CBP42338 1070 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 ARFIP2P53365 341 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 GKAP1Q5VSY0 366 aaPredicted RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 FBXO42Q6P3S6 717 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 VN1R5Q7Z5H4 357 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLPX-203ENST00000558958 TBC1D19Q8N5T2 526 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 C19orf47Q8N9M1 422 aaKnown RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 STON2Q8WXE9 905 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 CCT6BQ92526 530 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 MAELQ96JY0 434 aaKnown RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 ZMYND15Q9H091 742 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 WDR55Q9H6Y2 383 aaPredicted RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 TMEM9Q9P0T7 183 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 SEMA5BQ9P283 1151 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 PILRAQ9UKJ1 303 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 ATXN7L1Q9ULK2 861 aaPredicted RBP17.32■□□□□ 0.36
CLPX-203ENST00000558958 CCL27Q9Y4X3 112 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 UNC13CQ8NB66 2214 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 ZNF292O60281 2723 aa17.32■□□□□ 0.36
CLPX-203ENST00000558958 IGHV5-51A0A0C4DH38 117 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 FOXE1O00358 373 aaPredicted RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 EPHA3P29320 983 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 SERPINB1P30740 379 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 RPS15AP62244 130 aaKnown RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 DDX39BQ13838 428 aaKnown RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 CLPPQ16740 277 aaPredicted RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 TMEM71Q6P5X7 295 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 Q6ZSR9 355 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 TMPRSS9Q7Z410 1059 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 RNF175Q8N4F7 328 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 GBP7Q8N8V2 638 aaPredicted RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 MFSD9Q8NBP5 474 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 TTLQ8NG68 377 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 OR2T11Q8NH01 316 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 CDC6Q99741 560 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 DPYSL5Q9BPU6 564 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 BRF2Q9HAW0 419 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 KLHL3Q9UH77 587 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ADGRE2Q9UHX3 823 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 PCDHGA4Q9Y5G9 962 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ATP6AP2A0A1C7CYW4 349 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ANKDD1BA6NHY2 528 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 SLC28A1O00337 649 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 NTN3O00634 580 aaPredicted RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 ATP6AP2O75787 350 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 RASSF9O75901 435 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 HSD3B1P14060 373 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 HSD3B2P26439 372 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 GSTM2P28161 218 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 AHRP35869 848 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ACADVLP49748 655 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 CSTF3Q12996 717 aaKnown RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 CACHD1Q5VU97 1274 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ZNF574Q6ZN55 896 aaPredicted RBP17.31■□□□□ 0.36
CLPX-203ENST00000558958 RNF44Q7L0R7 432 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 PRSS42Q7Z5A4 293 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 PIP4P1Q86T03 277 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ACTRT2Q8TDY3 377 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 TCTN2Q96GX1 697 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 OR52B2Q96RD2 323 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ZFYVE21Q9BQ24 234 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ACPTQ9BZG2 426 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 SYNPO2LQ9H987 977 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 DMRT3Q9NQL9 472 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 PDP2Q9P2J9 529 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 ZFP69BQ9UJL9 534 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 PPT2Q9UMR5 302 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 AP1M2Q9Y6Q5 423 aa17.31■□□□□ 0.36
CLPX-203ENST00000558958 RIF1Q5UIP0 2472 aaKnown RBP17.3■□□□□ 0.36
CLPX-203ENST00000558958 GOLGA8QA0A0J9YX86 632 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 GOLGA8OA6NCC3 632 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 GOLGA8NF8WBI6 632 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 TOX3O15405 576 aaPredicted RBP17.3■□□□□ 0.36
CLPX-203ENST00000558958 RGS14O43566 566 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 VPS4BO75351 444 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 ZBTB11O95625 1053 aaPredicted RBP17.3■□□□□ 0.36
CLPX-203ENST00000558958 RPS13P62277 151 aaKnown RBP17.3■□□□□ 0.36
CLPX-203ENST00000558958 PHEXP78562 749 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 HMGCS1Q01581 520 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 CYP4F3Q08477 520 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 ACAD11Q709F0 780 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 LARP4Q71RC2 724 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLPX-203ENST00000558958 OR4D9Q8NGE8 314 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms