RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 VSIG1Q86XK7 387 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 PIANPQ8IYJ0 282 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 KRT78Q8N1N4 520 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 BBS5Q8N3I7 341 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 LNX2Q8N448 690 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 RNF10Q8N5U6 811 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 PRELID2Q8N945 189 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 RASGEF1AQ8N9B8 481 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TOR1AIP2Q8NFQ8 470 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 OR4K2Q8NGD2 314 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 LINC00476Q8WZB0 136 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SKA1Q96BD8 255 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ATXN7L3BQ96GX2 97 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 NAF1Q96HR8 494 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 HIC2Q96JB3 615 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TBATAQ96M53 351 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 PPM1MQ96MI6 270 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CCDC3Q9BQI4 270 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 MESP1Q9BRJ9 268 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 NUDT22Q9BRQ3 303 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SPATA16Q9BXB7 569 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TBC1D10AQ9BXI6 508 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 AP1M1Q9BXS5 423 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 GPR63Q9BZJ6 419 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DPEP2Q9H4A9 486 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 MAGEE1Q9HCI5 957 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 KLC4Q9NSK0 619 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 KCTD5Q9NXV2 234 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 NLGN3Q9NZ94 848 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TAAR2Q9P1P5 351 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ZNF624Q9P2J8 865 aaPredicted RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 LRIT1Q9P2V4 623 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 TBC1D29Q9UFV1 150 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CORO2BQ9UQ03 480 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DNAJC16Q9Y2G8 782 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 NEUROG3Q9Y4Z2 214 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ENTPD2Q9Y5L3 495 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 CSNK1G3Q9Y6M4 447 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 DGKBQ9Y6T7 804 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 ZZEF1O43149 2961 aa4.15□□□□□ -1.75
SPG11-211ENST00000558561 SNRNP200O75643 2136 aaKnown RBP4.15□□□□□ -1.75
SPG11-211ENST00000558561 EPG5Q9HCE0 2579 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 FREM2Q5SZK8 3169 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PCM1Q15154 2024 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 A6NCN8 305 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 NEMP2A6NFY4 417 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 OR2AG2A6NM03 316 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 HACD1B0YJ81 288 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GOLGA8KD6RF30 607 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GOLGA8TH3BQL2 631 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PSMD11O00231 422 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 NTN3O00634 580 aaPredicted RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 GRID2O43424 1007 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 KIF1CO43896 1103 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 CSO75390 466 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 BANF1O75531 89 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 POP7O75817 140 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 TJP3O95049 919 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SLC25A14O95258 325 aaPredicted RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 IFNB1P01574 187 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 FGGP02679 453 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 RPLP0P05388 317 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 IVLP07476 585 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 TPBGLP0DKB5 382 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 CCL4P13236 92 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ACP5P13686 325 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 CD1CP29017 333 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PDHA2P29803 388 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ALDH4A1P30038 563 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ACTR1BP42025 376 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 VPS41P49754 854 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SEC24CP53992 1094 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ACTR1AP61163 376 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PPP1CAP62136 330 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 MPP3Q13368 585 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 RAB32Q13637 225 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 NFE2L1Q14494 772 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 POU6F1Q14863 301 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 C16orf72Q14CZ0 275 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ISXQ2M1V0 245 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PLA1AQ53H76 456 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ZNF569Q5MCW4 686 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GPRC6AQ5T6X5 926 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 DUS1LQ6P1R4 473 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 ZDHHC24Q6UX98 284 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 Q6ZNX1 250 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 LDLRAD3Q86YD5 345 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 KLHDC8BQ8IXV7 354 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 NRSN1Q8IZ57 195 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 CLDN19Q8N6F1 224 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 UBL4BQ8N7F7 174 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 MAPK15Q8TD08 544 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ZNF398Q8TD17 642 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 CAVIN3Q969G5 261 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GLYATL1Q969I3 302 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 NMD3Q96D46 503 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 CDKN2AIPNLQ96HQ2 116 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 FBXL20Q96IG2 436 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PDLIM2Q96JY6 352 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 DNAJC1Q96KC8 554 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms