RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CSNK1A1LQ8N752 337 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TTC29Q8NA56 475 aaPredicted RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 MFSD9Q8NBP5 474 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 OR52B6Q8NGF0 335 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 PPP4R1Q8TF05 950 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 ATP6V1E2Q96A05 226 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 ARL8AQ96BM9 186 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 L3HYPDHQ96EM0 354 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 EFCAB11Q9BUY7 163 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 SARGQ9BW04 601 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 SLC7A5P2Q9GIP4 190 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 KCNK9Q9NPC2 374 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 DKK4Q9UBT3 224 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TMEM184BQ9Y519 407 aaPredicted RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 PCDHB3Q9Y5E6 796 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 AHCTF1Q8WYP5 2266 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 KCNE1BA0A087WTH5 132 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 STMND1H3BQB6 276 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 OR7A17O14581 309 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CPNE3O75131 537 aaKnown RBP16.65■□□□□ 0.26
TPM1-214ENST00000558544 WFS1O76024 890 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 DLGAP3O95886 979 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 SCTRP47872 440 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CCNG1P51959 295 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CDH13P55290 713 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 PCBP4P57723 403 aaKnown RBP16.65■□□□□ 0.26
TPM1-214ENST00000558544 GRM7Q14831 915 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 TBCCQ15814 346 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 RBBP7Q16576 425 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 AGBL2Q5U5Z8 902 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 ASPGQ86U10 573 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 MYLK4Q86YV6 388 aaPredicted RBP16.65■□□□□ 0.26
TPM1-214ENST00000558544 C10orf107Q8IVU9 208 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM1-214ENST00000558544 KRT78Q8N1N4 520 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CCNYL1Q8N7R7 359 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 GALNT6Q8NCL4 622 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CLIP3Q96DZ5 547 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 THAP11Q96EK4 314 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CDK15Q96Q40 435 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 MACROD1Q9BQ69 325 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 SPRY4Q9C004 299 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 ACTR8Q9H981 624 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 OXSMQ9NWU1 459 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 ACSL6Q9UKU0 697 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 RUVBL1Q9Y265 456 aaKnown RBP16.65■□□□□ 0.26
TPM1-214ENST00000558544 AP1M2Q9Y6Q5 423 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 APC2O95996 2303 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 CCDC88CQ9P219 2028 aa16.65■□□□□ 0.26
TPM1-214ENST00000558544 PRPF4O43172 522 aaKnown RBP eCLIP16.64■□□□□ 0.26
TPM1-214ENST00000558544 ATP8B1O43520 1251 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 CAPNS1P04632 268 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 SERPIND1P05546 499 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 CASP2P42575 452 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 CYP4F2P78329 520 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 CLCQ05315 142 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 TRAF3Q13114 568 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 LAPTM5Q13571 262 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 E2F2Q14209 437 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 PAGE2BQ5JRK9 111 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 LIPMQ5VYY2 423 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 GRHL2Q6ISB3 625 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 TMIGD1Q6UXZ0 262 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 TIPARPQ7Z3E1 657 aaKnown RBP16.64■□□□□ 0.26
TPM1-214ENST00000558544 TRPC4APQ8TEL6 797 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 FGF11Q92914 225 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 SH3GL2Q99962 352 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 NDC1Q9BTX1 674 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 MECRQ9BV79 373 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 DHCR7Q9UBM7 475 aaKnown RBP16.64■□□□□ 0.26
TPM1-214ENST00000558544 ZFP69BQ9UJL9 534 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 SEC16AO15027 2179 aa16.64■□□□□ 0.26
TPM1-214ENST00000558544 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 ACACAQ13085 2346 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 HYKKA2RU49 373 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 FITM1A5D6W6 292 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 PPP6CO00743 305 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 TM9SF1O15321 606 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 NDUFS4O43181 175 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 RAD1O60671 282 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 SLC35G6P0C7Q6 338 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 LIPCP11150 499 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 ALDH3A1P30838 453 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 AHRP35869 848 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 ETV4P43268 484 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 GCGRP47871 477 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 NAGLUP54802 743 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 DNAJB13P59910 316 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 PCDH1Q08174 1060 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 GPS2Q13227 327 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 MPP2Q14168 576 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 PRTGQ2VWP7 1150 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 TTMPQ5BVD1 217 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 ADNP2Q6IQ32 1131 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 C6orf15Q6UXA7 325 aaPredicted RBP16.64■□□□□ 0.25
TPM1-214ENST00000558544 GOLGA6L1Q8N7Z2 621 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms