RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 OR4D10Q8NGI6 311 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 C11orf45Q8TAV5 145 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 LRRC15Q8TF66 581 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 CHURC1Q8WUH1 139 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 MRPS27Q92552 414 aaKnown RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 PYCR2Q96C36 320 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ERP27Q96DN0 273 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 PGM2Q96G03 612 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 CFAP57Q96MR6 1250 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 KLHL5Q96PQ7 755 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 MYCBPQ99417 103 aaPredicted RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 CDCA3Q99618 268 aaPredicted RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 SDCBP2Q9H190 292 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 SNX25Q9H3E2 840 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 DNAJC4Q9NNZ3 241 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 HACD3Q9P035 362 aa2.79□□□□□ -1.96
SPG11-206ENST00000558093 ELF5Q9UKW6 265 aaPredicted RBP2.79□□□□□ -1.96
SPG11-206ENST00000558093 BICDL2A1A5D9 508 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 EPM2AB3EWF7 344 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 P4HA2O15460 535 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 POP4O95707 220 aaKnown RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 BAG3O95817 575 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 SERPING1P05155 500 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 FYNP06241 537 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 PTGER3P43115 390 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 RAD52P43351 418 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 PGFP49763 221 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CACNG1Q06432 222 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 COX10Q12887 443 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 LY6DQ14210 128 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 RBBP7Q16576 425 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 PTGISQ16647 500 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 LACTB2Q53H82 288 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 ARMC3Q5W041 872 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 OR4C11Q6IEV9 310 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 SLC30A6Q6NXT4 461 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CYB5D1Q6P9G0 228 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 GDPGP1Q6ZNW5 385 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CDHR3Q6ZTQ4 885 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ZSCAN30Q86W11 494 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 AMIGO1Q86WK6 493 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ZFAND4Q86XD8 727 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 GPC2Q8N158 579 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 OTUD6BQ8N6M0 293 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ANKRD13CQ8N6S4 541 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 PI4KAP1Q8N8J0 262 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 GBP7Q8N8V2 638 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 NPRL2Q8WTW4 380 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CHPT1Q8WUD6 406 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 RMDN1Q96DB5 314 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ALDH8A1Q9H2A2 487 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 RIMS4Q9H426 269 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 FN3KQ9H479 309 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ACTL8Q9H568 366 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CCDC177Q9NQR7 707 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 TBC1D13Q9NVG8 400 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CWC25Q9NXE8 425 aaPredicted RBP2.78□□□□□ -1.96
SPG11-206ENST00000558093 NLGN3Q9NZ94 848 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 CLIC5Q9NZA1 410 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 PKD2L2Q9NZM6 624 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 WDR35Q9P2L0 1181 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 BAIAP2L1Q9UHR4 511 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.78□□□□□ -1.96
SPG11-206ENST00000558093 COLEC10Q9Y6Z7 277 aa2.78□□□□□ -1.96
SPG11-206ENST00000558093 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 URADA6NGE7 173 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 CYTIPO60759 359 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 LUC7L3O95232 432 aaKnown RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 ADRB2P07550 413 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 EPORP19235 508 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 AOC1P19801 751 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 ACAT1P24752 427 aaKnown RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 KRT20P35900 424 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 CLDN15P56746 228 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 MZT1Q08AG7 82 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 FCHO2Q0JRZ9 810 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 ZNF177Q13360 481 aaPredicted RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 PEX6Q13608 980 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 RASA2Q15283 850 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 MS4A18Q3C1V0 323 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 CCDC92Q53HC0 331 aaPredicted RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 ATP1A1-AS1Q5TC04 95 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 TTC27Q6P3X3 843 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 PPP1R21Q6ZMI0 780 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 IL17RELQ6ZVW7 336 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 FAM131BQ86XD5 332 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 ERC1Q8IUD2 1116 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 HSCBQ8IWL3 235 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 POM121L12Q8N7R1 296 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 CAMKVQ8NCB2 501 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 SEPT1Q8WYJ6 367 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 RMDN2Q96LZ7 410 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 FOXN4Q96NZ1 517 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 LRRC3BQ96PB8 259 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 OVOL2Q9BRP0 275 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 RPP25Q9BUL9 199 aaKnown RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 PUS3Q9BZE2 481 aaKnown RBP2.77□□□□□ -1.97
SPG11-206ENST00000558093 RABEP2Q9H5N1 569 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 EGLN3Q9H6Z9 239 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 ANKEF1Q9NU02 776 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms