RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 APBB3O95704 486 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLC35G4P0C7Q5 338 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 C1GALT1C1LP0DN25 315 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 BCKDHAP12694 445 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 AMD1P17707 334 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 XRCC1P18887 633 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 GNAZP19086 355 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 JAK1P23458 1154 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TACR1P25103 407 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 AK4P27144 223 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 AKT2P31751 481 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 MSX2P35548 267 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 HNF4AP41235 474 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ERFP50548 548 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 CCR5P51681 352 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 POLR2JP52435 117 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 DGKQP52824 942 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 STARD6P59095 220 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 MS4A2Q01362 244 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 PRKCQQ04759 706 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TSTA3Q13630 321 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLBPQ14493 270 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPG11-204ENST00000557866 PTGR1Q14914 329 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ARHGAP19Q14CB8 494 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 RPE65Q16518 533 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ALG11Q2TAA5 492 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TRMT5Q32P41 509 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 MMEL1Q495T6 779 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 COQ5Q5HYK3 327 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 C1orf146Q5VVC0 180 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ATG9BQ674R7 924 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 KIAA0895LQ68EN5 471 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ANO7Q6IWH7 933 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 LCTLQ6UWM7 567 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 BNC2Q6ZN30 1099 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 TMPRSS11BQ86T26 416 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TBC1D21Q8IYX1 336 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SYNPOQ8N3V7 929 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 LIX1Q8N485 282 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 ENDOVQ8N8Q3 282 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 LINC01555Q8NAE3 123 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 OR7G3Q8NG95 312 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 CCL4L1Q8NHW4 92 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 MAGEC3Q8TD91 643 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SETD7Q8WTS6 366 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 TSPEARQ8WU66 669 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLC5A11Q8WWX8 675 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TSACCQ96A04 125 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 CCDC124Q96CT7 223 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 CMTM7Q96FZ5 175 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 APOLD1Q96LR9 279 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 MAGEB10Q96LZ2 347 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 C12orf66Q96MD2 445 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 WDR92Q96MX6 357 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 OR2M4Q96R27 311 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 KRTAP4-12Q9BQ66 201 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLC39A3Q9BRY0 314 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 OSGEPL1Q9H4B0 414 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SOX17Q9H6I2 414 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 LTB4R2Q9NPC1 389 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TMEM45AQ9NWC5 275 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SPATA6Q9NWH7 488 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 WSB2Q9NYS7 404 aaPredicted RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLAMF8Q9P0V8 285 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TMEM181Q9P2C4 612 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TBC1D29Q9UFV1 150 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 CD300AQ9UGN4 299 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 MOSPD1Q9UJG1 213 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 CROTQ9UKG9 612 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 POMPQ9Y244 141 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 EIF3LQ9Y262 564 aaKnown RBP7.1□□□□□ -1.27
SPG11-204ENST00000557866 L3MBTL1Q9Y468 752 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 NEUROG3Q9Y4Z2 214 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 HS3ST3A1Q9Y663 406 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 KCNE2Q9Y6J6 123 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 SLCO1B1Q9Y6L6 691 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 TRPM6Q9BX84 2022 aa7.1□□□□□ -1.27
SPG11-204ENST00000557866 PRORSD1PA6NEY8 169 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CCDC154A6NI56 674 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 FAM170BA6NMN3 283 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 MAGEB17A8MXT2 336 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ACOT8O14734 319 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SEC22BO75396 215 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 KLHL18O94889 574 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PSMG1O95456 288 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RPN2P04844 631 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PCNAP12004 261 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CDH1P12830 882 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SDC1P18827 310 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CCND1P24385 295 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CLDN8P56748 225 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 KCNK10P57789 538 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RPS13P62277 151 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 PHC1P78364 1004 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RAE1P78406 368 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 ZP2Q05996 745 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms