RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 POLR2CP19387 275 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 CYP3A5P20815 502 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 DRD5P21918 477 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 PAICSP22234 425 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 CBLP22681 906 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 DGKAP23743 735 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 OR3A3P47888 321 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 TNFSF10P50591 281 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 UBE2HP62256 183 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 RPP38P78345 283 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 MYBPC1Q00872 1141 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 NHLH1Q02575 133 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ZNF91Q05481 1191 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 RASGEF1BQ0VAM2 473 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 GPR18Q14330 331 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 STX1AQ16623 288 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ODF4Q2M2E3 257 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 TMEM119Q4V9L6 283 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 TMEM35AQ53FP2 167 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 CMPK2Q5EBM0 449 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 PAPPA-AS1Q5QFB9 102 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 HECTD2Q5U5R9 776 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 OTUD1Q5VV17 481 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 NKAIN2Q5VXU1 208 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 OR4A47Q6IF82 309 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 CDHR3Q6ZTQ4 885 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LGI2Q8N0V4 545 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LRRC17Q8N6Y2 441 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 OR13J1Q8NGT2 312 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LPAR1Q92633 364 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 PIGTQ969N2 578 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 PHF21AQ96BD5 680 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LGALS12Q96DT0 336 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ZNF48Q96MX3 618 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 PRMT1Q99873 361 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 NTMT1Q9BV86 223 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ZMYND12Q9H0C1 365 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 SDCBP2Q9H190 292 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 VCX2Q9H322 139 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 RNF121Q9H920 327 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 WDR76Q9H967 626 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 MARCH7Q9H992 704 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 KRCC1Q9NPI7 259 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 PHPT1Q9NRX4 125 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 TMEM184CQ9NVA4 438 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 AIPL1Q9NZN9 384 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 MSRB1Q9NZV6 116 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 MALT1Q9UDY8 824 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 TEKT2Q9UIF3 430 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 AMDHD2Q9Y303 409 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 MRPS2Q9Y399 296 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 CKAP5Q14008 2032 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ZMYM2Q9UBW7 1377 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 IGHV4-28A0A0C4DH34 117 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 A0A1W2PPC1 479 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 hDV102S1A0JD36 115 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TMEM89A2RUT3 159 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 GRID2IPA4D2P6 1211 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 FAM47DPA6NHR8 397 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ZSCAN5BA6NJL1 495 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 A8MUI8 341 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 E9PBE3 544 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 LGALS8O00214 317 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CHEK1O14757 476 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CHUKO15111 745 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 LRP3O75074 770 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ERLIN1O75477 346 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CLN5O75503 358 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PIGNO95427 931 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 GSTA2P09210 222 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CETPP11597 493 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 KRT3P12035 628 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CSF2RAP15509 400 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ARSBP15848 533 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 MAKP20794 623 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 HTR2AP28223 471 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 SFTPDP35247 375 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 MAGEA11P43364 429 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TNFRSF4P43489 277 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 VAMP7P51809 220 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ATP5IP56385 69 aaPredicted RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 RPS18P62269 152 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 TNFRSF17Q02223 184 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ZNF415Q09FC8 603 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 NME3Q13232 169 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 IDI1Q13907 227 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 LSM12Q3MHD2 195 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 HSP90AB3PQ58FF7 597 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 STXBP5Q5T5C0 1151 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 NDUFAF5Q5TEU4 345 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PAPD7Q5XG87 772 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 TPGS2Q68CL5 300 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 NCR3LG1Q68D85 454 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 FCRLBQ6BAA4 426 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CTR9Q6PD62 1173 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ANGPTL8Q6UXH0 198 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms