RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HIST1H2ADP20671 130 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 SPAM1P38567 509 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 SOWAHCQ53LP3 525 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 HECTD3Q5T447 861 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF544Q6NX49 715 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC24A5Q71RS6 500 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 NANOGNBQ7Z5D8 188 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 RTN4RL1Q86UN2 441 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CLECL1Q8IZS7 167 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CELF2-AS1Q8N7Q2 184 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 DENND6BQ8NEG7 585 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 OR10G2Q8NGC3 310 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 OR8J2Q8NGG1 315 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 HIST1H2AHQ96KK5 128 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 FCRL1Q96LA6 429 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 HIST1H2AJQ99878 128 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 H2AFJQ9BTM1 129 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 DOHHQ9BU89 302 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 EMILIN2Q9BXX0 1053 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 GPR62Q9BZJ7 368 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 RAD18Q9NS91 495 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 FZD4Q9ULV1 537 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF451Q9Y4E5 1061 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PDZK1P1A8MUH7 402 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CLDN7O95471 211 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PTHP01270 115 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 TRBC1P01850 177 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ANXA8P13928 327 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ATF6P18850 670 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PPIBP23284 216 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PTX3P26022 381 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 MZF1P28698 734 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 NSG1P42857 185 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 LIMK1P53667 647 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 FAM189BP81408 668 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ST3GAL4Q11206 333 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.588e-7■■■□□ 16.4
VIPAS39-211ENST00000557658 TIMM50Q3ZCQ8 353 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 TOR1AIP1Q5JTV8 583 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 RSPO2Q6UXX9 243 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CCDC190Q86UF4 302 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC5A8Q8N695 610 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CDC26Q8NHZ8 85 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 C9orf43Q8TAL5 461 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 SPPL2AQ8TCT8 520 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CEP19Q96LK0 163 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 MAGEB10Q96LZ2 347 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CCDC32Q9BV29 185 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 GKN1Q9NS71 199 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 KLHL42Q9P2K6 505 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 CFL2Q9Y281 166 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 WBP11Q9Y2W2 641 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 PCDHGA2Q9Y5H1 932 aa11.42□□□□□ -0.58
VIPAS39-211ENST00000557658 FAM172BPA6NC97 362 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 COCHO43405 550 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 DNTTP04053 509 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 C8GP07360 202 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 IRF1P10914 325 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 PIK3CBP42338 1070 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC6A12P48065 614 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 HNMTP50135 292 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 OR2B6P58173 313 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 IRF3Q14653 427 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 PTCHD3Q3KNS1 767 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 FAM26DQ5JW98 314 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SPATC1Q76KD6 591 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC12A9Q9BXP2 914 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 TM6SF2Q9BZW4 377 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 CCDC177Q9NQR7 707 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 IMPAD1Q9NX62 359 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 FBXL12Q9NXK8 326 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF226Q9NYT6 803 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 EIF3FO00303 357 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 GFRA2O00451 464 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 KIAA0513O60268 411 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 NUDT7P0C024 238 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 AOAHP28039 575 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 AQP1P29972 269 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC15A1P46059 708 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 CRYBA2P53672 197 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 CYP4F2P78329 520 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 BCL2L1Q07817 233 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 PRR23CQ6ZRP0 262 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 NLGN4XQ8N0W4 816 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 OR6K2Q8NGY2 324 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 UTP15Q8TED0 518 aaKnown RBP11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 SKA2Q8WVK7 121 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 DUSP26Q9BV47 211 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 NDEL1Q9GZM8 345 aa11.41□□□□□ -0.58
VIPAS39-211ENST00000557658 DNAJC11Q9NVH1 559 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms