RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 OR56A5P0C7T3 313 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 ITGA2P17301 1181 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 CYP2A7P20853 494 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 AOAHP28039 575 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 RRM2P31350 389 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 RGS6P49758 472 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 PRSS36Q5K4E3 855 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 C10orf62Q5T681 223 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-231ENST00000557433 ZDHHC20Q5W0Z9 365 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 DESI1Q6ICB0 168 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 RETSATQ6NUM9 610 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 MBOAT1Q6ZNC8 495 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 TPGS1Q6ZTW0 290 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 C16orf59Q7L2K0 433 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 FAM124AQ86V42 546 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 STX19Q8N4C7 294 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 HJURPQ8NCD3 748 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-231ENST00000557433 C11orf65Q8NCR3 313 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 UBE2FQ969M7 185 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 YIPF2Q9BWQ6 316 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 OR2B2Q9GZK3 357 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 SIAEQ9HAT2 523 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 CNOT2Q9NZN8 540 aaKnown RBP15.73■□□□□ 0.11
SHMT2-231ENST00000557433 TRPM5Q9NZQ8 1165 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 VPS51Q9UID3 782 aa15.73■□□□□ 0.11
SHMT2-231ENST00000557433 FCF1Q9Y324 198 aaKnown RBP15.73■□□□□ 0.11
SHMT2-231ENST00000557433 SEPT4O43236 478 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 KRT8P05787 483 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ADORA3P0DMS8 318 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 C21orf33P30042 268 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 TIE1P35590 1138 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 TGFBR1P36897 503 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 PIK3CBP42338 1070 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 SEPHS1P49903 392 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 NEK2P51955 445 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ARMCX4Q5H9R4 360 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ATXN7L2Q5T6C5 722 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 AGAP6Q5VW22 663 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 GPR153Q6NV75 609 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ZNF544Q6NX49 715 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 FUT10Q6P4F1 479 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CCBE1Q6UXH8 406 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CCDC103Q8IW40 242 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 OR10G2Q8NGC3 310 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ASB11Q8WXH4 323 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 TPD52L3Q96J77 140 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 EGLN2Q96KS0 407 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 AGAP4Q96P64 663 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 COPS8Q99627 209 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 MYOCQ99972 504 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CDCA4Q9BXL8 241 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 NUAK2Q9H093 628 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 RACGAP1Q9H0H5 632 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 C3orf14Q9HBI5 128 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 SPATA7Q9P0W8 599 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 FAM172BPA6NC97 362 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 KPNA5O15131 536 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ALOX12P18054 663 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 GABRB1P18505 474 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CST5P28325 142 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CA5AP35218 305 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 HNF1BP35680 557 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 SLC19A1P41440 591 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 SELENOWP63302 87 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 PPIGQ13427 754 aaKnown RBP eCLIP15.72■□□□□ 0.113e-8■□□□□ 10.3
SHMT2-231ENST00000557433 PTCHD3Q3KNS1 767 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 PLEKHS1Q5SXH7 462 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 C19orf48Q6RUI8 117 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 RSPO2Q6UXX9 243 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CCDC190Q86UF4 302 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ST13P5Q8NFI4 369 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 LINC01599Q8WXQ3 324 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 TMCO6Q96DC7 493 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 CXorf40BQ96DE9 158 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 KCNC2Q96PR1 638 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 DUSP26Q9BV47 211 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 C2orf49Q9BVC5 232 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 THSD1Q9NS62 852 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 VPS29Q9UBQ0 182 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 ZNF282Q9UDV7 671 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-231ENST00000557433 FZD4Q9ULV1 537 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 PCDHGA2Q9Y5H1 932 aa15.72■□□□□ 0.11
SHMT2-231ENST00000557433 IGLV3-16A0A075B6K0 115 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 GLTPD2A6NH11 291 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 SCAMP2O15127 329 aaKnown RBP15.71■□□□□ 0.11
SHMT2-231ENST00000557433 ZW10O43264 779 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 PARNO95453 639 aaKnown RBP15.71■□□□□ 0.11
SHMT2-231ENST00000557433 CLDN7O95471 211 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 CPSF4O95639 269 aaKnown RBP15.71■□□□□ 0.11
SHMT2-231ENST00000557433 B3GALT4O96024 378 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 MZF1P28698 734 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-231ENST00000557433 FPGSQ05932 587 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 RBBP4Q09028 425 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 KCNA10Q16322 511 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 HEATR4Q86WZ0 1026 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 KRT73Q86Y46 540 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 SYTL1Q8IYJ3 562 aa15.71■□□□□ 0.11
SHMT2-231ENST00000557433 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms