RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FAM172BPA6NC97 362 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 BMPR1BO00238 502 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NDUFS7O75251 213 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 RTN2O75298 545 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ZNF432O94892 652 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 TNFSF15O95150 251 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 IGKV3-20P01619 116 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 CXCL8P10145 99 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ZNF23P17027 643 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 HMGA1P17096 107 aaKnown RBP3.67□□□□□ -1.82
CHD8-212ENST00000557329 ANXA13P27216 316 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 SSTR2P30874 369 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NAMPTP43490 491 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ARRB1P49407 418 aaPredicted RBP3.67□□□□□ -1.82
CHD8-212ENST00000557329 ACADVLP49748 655 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 PDLIM4P50479 330 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 EFNA5P52803 228 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 CDH8P55286 799 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 FOXM1Q08050 763 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 GOLGA8DPQ0D2H9 430 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NAE1Q13564 534 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 MYLK3Q32MK0 819 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 LINC00303Q3SY05 128 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 FUT11Q495W5 492 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ALFQ53S48 1182 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 KCNT1Q5JUK3 1230 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 FAM69AQ5T7M9 428 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 FHL5Q5TD97 284 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 WSCD1Q658N2 575 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 SIGIRRQ6IA17 410 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 LCTLQ6UWM7 567 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ALKAL1Q6UXT8 129 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NR2C2APQ86WQ0 139 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 TMEM25Q86YD3 366 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 RNF113BQ8IZP6 322 aaKnown RBP3.67□□□□□ -1.82
CHD8-212ENST00000557329 BLIDQ8IZY5 108 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 SPATA6LQ8N4H0 392 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NAXEQ8NCW5 288 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 THAP6Q8TBB0 222 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 LMLNQ96KR4 655 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 FAM20AQ96MK3 541 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 BBS2Q9BXC9 721 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 TRIM9Q9C026 710 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 SLC25A18Q9H1K4 315 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 NDST4Q9H3R1 872 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 TMEM206Q9H813 350 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 POLR1BQ9H9Y6 1135 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 PREBQ9HCU5 417 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 HINT3Q9NQE9 182 aaKnown RBP3.67□□□□□ -1.82
CHD8-212ENST00000557329 GDF3Q9NR23 364 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 STARD5Q9NSY2 213 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 ARHGAP26Q9UNA1 814 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 SLCO1B1Q9Y6L6 691 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 PTPN13Q12923 2485 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 AHCTF1Q8WYP5 2266 aa3.67□□□□□ -1.82
CHD8-212ENST00000557329 PTPRDP23468 1912 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 MYO18AQ92614 2054 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 MYOFQ9NZM1 2061 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 A0A0B4J293 547 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 A0A0G2JPF8 293 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 A0A1B0GTQ1 180 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 LILRA5A6NI73 299 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 HNRNPCL3B7ZW38 293 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SOCS6O14544 535 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CPLX1O14810 134 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SLC16A4O15374 487 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CLDN3O15551 220 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 EDIL3O43854 480 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 DFNA5O60443 496 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 HNRNPCL1O60812 293 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 DAB1O75553 588 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 TMEM63AO94886 807 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CCNDBP1O95273 360 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SEMA4FO95754 770 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 DNTTP04053 509 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 KRT19P08727 400 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 THEGLP0DJG4 465 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 HNRNPCL4P0DMR1 293 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 MCF2P10911 925 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 KCNE1P15382 129 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 ZNF182P17025 639 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 TYMPP19971 482 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 ACSL1P33121 698 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 GNL1P36915 607 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 HNRNPH2P55795 449 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 DLX5P56178 289 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 ERVPABLB-1P60509 514 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 CSNK2A1P68400 391 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 PITX1P78337 314 aaPredicted RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 SLC20A2Q08357 652 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 ILF3Q12906 894 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHD8-212ENST00000557329 GAGE5Q13069 117 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 GAGE6Q13070 117 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 DCTN2Q13561 401 aaKnown RBP3.66□□□□□ -1.82
CHD8-212ENST00000557329 TGIF1Q15583 401 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 EFNB3Q15768 340 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 DPCR1Q3MIW9 517 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 POM121L1PQ3SYA9 428 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 SLC9B1Q4ZJI4 515 aa3.66□□□□□ -1.82
CHD8-212ENST00000557329 ACAD10Q6JQN1 1059 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms