RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 BLMHQ13867 455 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ERV3-1Q14264 604 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 DEFB109BQ30KR1 87 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 SYTL3Q4VX76 610 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 DNAJC21Q5F1R6 531 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 THEMIS2Q5TEJ8 643 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 PGBD2Q6P3X8 592 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 LRRC8BQ6P9F7 803 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ZNF517Q6ZMY9 492 aaPredicted RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ATG14Q6ZNE5 492 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ZNF534Q76KX8 674 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 TMEM126BQ8IUX1 230 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ADGRF3Q8IZF5 1079 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 MPP5Q8N3R9 675 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 HIPK4Q8NE63 616 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 OR5K2Q8NHB8 316 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 CT55Q8WUE5 264 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ASZ1Q8WWH4 475 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 CPT1BQ92523 772 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 TRAPPC9Q96Q05 1148 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 TWSG1Q9GZX9 223 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 CHRNA10Q9GZZ6 450 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 MYOTQ9UBF9 498 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 SCOCQ9UIL1 159 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 FARSAQ9Y285 508 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 PPP2R2CQ9Y2T4 447 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 MRPS18BQ9Y676 258 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 COL6A6A6NMZ7 2263 aa9.47□□□□□ -0.89
HNRNPC-228ENST00000557033 HMX2A2RU54 273 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PRMT5O14744 637 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 ZNF500O60304 480 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 GPC4O75487 556 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 RPN2P04844 631 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 APOA4P06727 396 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 HBQ1P09105 142 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 ST6GAL1P15907 406 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 TPSB2P20231 275 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PTPN4P29074 926 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 CCR7P32248 378 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 KCNJ1P48048 391 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 SESN2P58004 480 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 SARNPP82979 210 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 TPSAB1Q15661 275 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PRAMEF9Q5VWM5 478 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 FBXO38Q6PIJ6 1188 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 MICALCLQ6ZW33 695 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 SYVN1Q86TM6 617 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 HOOK3Q86VS8 718 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 LRRC6Q86X45 466 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 SYTL1Q8IYJ3 562 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 SLC22A15Q8IZD6 547 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 OR5AR1Q8NGP9 310 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 THAP4Q8WY91 577 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 RGMAQ96B86 450 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 MAP6Q96JE9 813 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PBKQ96KB5 322 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PPM1MQ96MI6 270 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 PANX3Q96QZ0 392 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 HGH1Q9BTY7 390 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 KIFC1Q9BW19 673 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 AP1M1Q9BXS5 423 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 XKR8Q9H6D3 395 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 MRM3Q9HC36 420 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 TREX1Q9NSU2 369 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 ICKQ9UPZ9 632 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 JRKLQ9Y4A0 524 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 FASNP49327 2511 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.9
HNRNPC-228ENST00000557033 MAGEB16A2A368 324 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 J3KRW8 73 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 PFDN6O15212 129 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 PHGDHO43175 533 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 SLCO2B1O94956 709 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 CSTBP04080 98 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 CELA3BP08861 270 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 CHRM5P08912 532 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 TPBGLP0DKB5 382 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 AOAHP28039 575 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 CXCR5P32302 372 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 MAGEA6P43360 314 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 HSPA14Q0VDF9 509 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 GPS2Q13227 327 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 SEMA3AQ14563 771 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 KIR2DS3Q14952 304 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 ZNF789Q5FWF6 425 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 PLEKHS1Q5SXH7 462 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 ATP1A1-AS1Q5TC04 95 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 PTRHD1Q6GMV3 140 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 FAM199XQ6PEV8 388 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 SPESP1Q6UW49 350 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 UNC5DQ6UXZ4 953 aa9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 SDCCAG8Q86SQ7 713 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 APLFQ8IW19 511 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-228ENST00000557033 DSELQ8IZU8 1212 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms