RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 ZNF548Q8NEK5 533 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 OR52B6Q8NGF0 335 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 METTL2AQ96IZ6 378 aaKnown RBP13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SLC25A23Q9BV35 468 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SYNDIG1Q9H7V2 258 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 AKTIPQ9H8T0 292 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 POLG2Q9UHN1 485 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ZNF225Q9UK10 706 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 F8P00451 2351 aa13.74□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CELSR1Q9NYQ6 3014 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 NPIPB8E9PQR5 432 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PSMD12O00232 456 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FPGTO14772 594 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CLGNO14967 610 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 NVLO15381 856 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 GSC2O15499 205 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ULK1O75385 1050 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 WFS1O76024 890 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CAPN1P07384 714 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KRT16P08779 473 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ACPPP15309 386 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HNF4AP41235 474 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 YPEL5P62699 121 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CTBSQ01459 385 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PTK2BQ14289 1009 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PTCHD3Q3KNS1 767 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 COQ5Q5HYK3 327 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MIER2Q8N344 545 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SNX31Q8N9S9 440 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 OR9A1PQ8NGU1 263 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 OR56A3Q8NH54 315 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CFAP61Q8NHU2 1237 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 NAT14Q8WUY8 206 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RAD51AP1Q96B01 352 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SCARF2Q96GP6 870 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 OR52A5Q9H2C5 316 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ACTR8Q9H981 624 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 EFCAB1Q9HAE3 211 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MRPL40Q9NQ50 206 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SPATA7Q9P0W8 599 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 STOX2Q9P2F5 926 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ADGRG4Q8IZF6 3080 aa13.73□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TMEM202A6NGA9 273 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TNFRSF10CO14798 259 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SLC31A1O15431 190 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MGRN1O60291 552 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PAK4O96013 591 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HSD3B1P14060 373 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HNRNPA2B1P22626 353 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HSD3B2P26439 372 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HTR1BP28222 390 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ACADLP28330 430 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PBLDP30039 288 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 AKT2P31751 481 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 IGFALSP35858 605 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PREPP48147 710 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RAP1GDS1P52306 607 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FOXA1P55317 472 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KCNJ2P63252 427 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ABRQ12979 859 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FASTKQ14296 549 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FGL2Q14314 439 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RPS6KA2Q15349 733 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 METRNLQ641Q3 311 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 AGTRAPQ6RW13 159 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TRIM74Q86UV6 250 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ZFAND4Q86XD8 727 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TICAM1Q8IUC6 712 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 C10orf67Q8IYJ2 551 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RBM15BQ8NDT2 890 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SSC4DQ8WTU2 575 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 USP7Q93009 1102 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 REPS1Q96D71 796 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SERPINI1Q99574 410 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MIPEPQ99797 713 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 BRINP2Q9C0B6 783 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PCBD2Q9H0N5 130 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TUBB1Q9H4B7 451 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 EHD1Q9H4M9 534 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ZNF71Q9NQZ8 489 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SDR39U1Q9NRG7 319 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ASIC5Q9NY37 505 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ZIM2Q9NZV7 527 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms