RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 GATA2P23769 480 aaPredicted RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 ADORA1P30542 326 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 HNF4AP41235 474 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 MFAP4P55083 255 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 B3GALT5-AS1P59052 145 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 AIMP2Q13155 320 aaKnown RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 NECTIN1Q15223 517 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 E2F5Q15329 346 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 CCDC57Q2TAC2 916 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 C2CD6Q53TS8 623 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 TCTEX1D4Q5JR98 221 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 CCDC70Q6NSX1 233 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 PAQR6Q6TCH4 344 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 TMCO3Q6UWJ1 677 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 COMMD2Q86X83 199 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 HOGA1Q86XE5 327 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 OR13J1Q8NGT2 312 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 CD99L2Q8TCZ2 262 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 ARHGAP45Q92619 1136 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 OPTNQ96CV9 577 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 USP28Q96RU2 1077 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 FNBP1Q96RU3 617 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 FNDC11Q9BVV2 318 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 DGCR6LQ9BY27 220 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 UPF3AQ9H1J1 476 aaKnown RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 S1PR5Q9H228 398 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 PPIL3Q9H2H8 161 aaKnown RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 SMARCAD1Q9H4L7 1026 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 OSER1Q9NX31 292 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.26□□□□□ -1.73
PRPF39-209ENST00000556353 MTUS1Q9ULD2 1270 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 GRIP1Q9Y3R0 1128 aa4.26□□□□□ -1.73
PRPF39-209ENST00000556353 LTBP2Q14767 1821 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 MROH5Q6ZUA9 1318 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 KIF16BQ96L93 1317 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 C5orf42Q9H799 3197 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 LNP1A1A4G5 178 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 PGPEP1LA6NFU8 196 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 TCP10L2B9ZVM9 353 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 F5H0A9 414 aaPredicted RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 TIMM44O43615 452 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 DFFBO76075 338 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 MAPK4P31152 587 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 NF2P35240 595 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 GARSP41250 739 aaKnown RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 CCR10P46092 362 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 NR1D2Q14995 579 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 MAPRE1Q15691 268 aaKnown RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 KLHL26Q53HC5 615 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 HAUS6Q7Z4H7 955 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 PTAR1Q7Z6K3 402 aaPredicted RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 CFAP206Q8IYR0 622 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 OR2AJ1Q8NGZ0 328 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 ZFAND2BQ8WV99 257 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 IRGQQ8WZA9 623 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 OMA1Q96E52 524 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 GPATCH1Q9BRR8 931 aaKnown RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 BTBD10Q9BSF8 475 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 LMF2Q9BU23 707 aaKnown RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 NUP85Q9BW27 656 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 DPAGT1Q9H3H5 408 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 KCNK15Q9H427 330 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 FGF21Q9NSA1 209 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 BRWD1Q9NSI6 2320 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 ZNF701Q9NV72 531 aaPredicted RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 ZHX1Q9UKY1 873 aaPredicted RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 GRID1Q9ULK0 1009 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 PA2G4Q9UQ80 394 aaKnown RBP4.25□□□□□ -1.73
PRPF39-209ENST00000556353 CSAG2Q9Y5P2 127 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 MYH4Q9Y623 1939 aa4.25□□□□□ -1.73
PRPF39-209ENST00000556353 ANKRD61A6NGH8 418 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 HEPACAM2A8MVW5 462 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 ZNF195O14628 629 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 XRCC3O43542 346 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 CREG1O75629 220 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 AZU1P20160 251 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 ARSEP51690 589 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 RAPSNQ13702 412 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 PKN2Q16513 984 aaKnown RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 TAF1BQ53T94 588 aaPredicted RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 FAAH2Q6GMR7 532 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 LMNTD2Q8IXW0 634 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 KIRREL3Q8IZU9 778 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 TTC39CQ8N584 583 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 OR5M8Q8NGP6 311 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 PHLDA1Q8WV24 401 aaPredicted RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 HDAC2Q92769 488 aaKnown RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 AZIN2Q96A70 460 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 SAT2Q96F10 170 aaPredicted RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 NEK1Q96PY6 1258 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 MYCBPQ99417 103 aaPredicted RBP4.24□□□□□ -1.73
PRPF39-209ENST00000556353 LRRC61Q9BV99 259 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 WWTR1Q9GZV5 400 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 CACNG4Q9UBN1 327 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 PPP1R3CQ9UQK1 317 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 TRIM17Q9Y577 477 aa4.24□□□□□ -1.73
PRPF39-209ENST00000556353 WDFY4Q6ZS81 3184 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms