RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DDX39BQ13838 428 aaKnown RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 ABRAXAS2Q15018 415 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 TERF2Q15554 542 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 TMEM35AQ53FP2 167 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 CACHD1Q5VU97 1274 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 ZNF425Q6IV72 752 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 GUSBP11Q6P575 273 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 CYB5D1Q6P9G0 228 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 FAM92BQ6ZTR7 304 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 PAGE2Q7Z2X7 111 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 PAQR7Q86WK9 346 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 NAXDQ8IW45 347 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 C19orf47Q8N9M1 422 aaKnown RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 CAMKVQ8NCB2 501 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 HUS1BQ8NHY5 278 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 C10orf82Q8WW14 230 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 PPP1R36Q96LQ0 422 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 TRAPPC9Q96Q05 1148 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 GFM1Q96RP9 751 aaKnown RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 NRTNQ99748 197 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 ZFYVE21Q9BQ24 234 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 TUBB6Q9BUF5 446 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 SYNDIG1Q9H7V2 258 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 LRTM1Q9HBL6 345 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 SLC6A20Q9NP91 592 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 CUEDC1Q9NWM3 386 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 C1orf109Q9NX04 203 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 SOHLH2Q9NX45 425 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 AKAP7Q9P0M2 348 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 HEY2Q9UBP5 337 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 SLC12A4Q9UP95 1085 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 BTRCQ9Y297 605 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 AP1M2Q9Y6Q5 423 aa8.84□□□□□ -0.99
ACTN1-218ENST00000556343 TNRC6BQ9UPQ9 1833 aaKnown RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 ARHGEF17Q96PE2 2063 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-218ENST00000556343 A0A088AWK7 358 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 A0A1B0GTL3 188 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ARHGAP10A1A4S6 786 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SLC9B1P1A6NJY1 282 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 C4orf47A7E2U8 309 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SDHDO14521 159 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ZNF195O14628 629 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 UBDO15205 165 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ZSCAN9O15535 394 aaPredicted RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 PRAMEF4O60810 478 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 PEX11AO75192 247 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SEMA3DO95025 777 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 C9P02748 559 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 RPLP0P05388 317 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 SERPINA6P08185 405 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SLC35G6P0C7Q6 338 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 CD59P13987 128 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 DDX5P17844 614 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 NCF2P19878 526 aaPredicted RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 CD22P20273 847 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ZNF10P21506 573 aaPredicted RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 PRPH2P23942 346 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 EPHA3P29320 983 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 RAP1GDS1P52306 607 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ARFIP1P53367 373 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 RPS13P62277 151 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 SKP1P63208 163 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 CCL7P80098 99 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 HSD11B2P80365 405 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 MEF2AQ02078 507 aaPredicted RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 EMX2Q04743 252 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SF3A3Q12874 501 aaKnown RBP eCLIP8.83□□□□□ -1
ACTN1-218ENST00000556343 TRA2AQ13595 282 aaKnown RBP eCLIP8.83□□□□□ -1
ACTN1-218ENST00000556343 SPIDRQ14159 915 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 GSTA3Q16772 222 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 NDUFA9Q16795 377 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 AP5B1Q2VPB7 878 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 LSM12Q3MHD2 195 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 SLC9B1Q4ZJI4 515 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SPIN4Q56A73 249 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 XKR7Q5GH72 579 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 TCTE1Q5JU00 501 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 PRAMEF9Q5VWM5 478 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 NKAIN2Q5VXU1 208 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 CGB2Q6NT52 195 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 NIPAL1Q6NVV3 410 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SCIMPQ6UWF3 145 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 USP53Q70EK8 1073 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 PRSS42Q7Z5A4 293 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ASPGQ86U10 573 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 TRIM73Q86UV7 250 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 FNDC5Q8NAU1 212 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 OR4D9Q8NGE8 314 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 FLVCR1-AS1Q8TAF5 88 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 SLC13A3Q8WWT9 602 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 RGMAQ96B86 450 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 MAELQ96JY0 434 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 LRRC37BQ96QE4 947 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 MTERF1Q99551 399 aaKnown RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 MAP3K3Q99759 626 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 ROGDIQ9GZN7 287 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 TUBB1Q9H4B7 451 aa8.83□□□□□ -1
ACTN1-218ENST00000556343 WDR55Q9H6Y2 383 aaPredicted RBP8.83□□□□□ -1
ACTN1-218ENST00000556343 AKTIPQ9H8T0 292 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms