RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 NDNQ99608 321 aa12.57□□□□□ -0.4
TGFB3-204ENST00000556285 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.57□□□□□ -0.4
TGFB3-204ENST00000556285 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
TGFB3-204ENST00000556285 KLHL42Q9P2K6 505 aa12.57□□□□□ -0.4
TGFB3-204ENST00000556285 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
TGFB3-204ENST00000556285 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
TGFB3-204ENST00000556285 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 ZNF839A8K0R7 811 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 SGK494L7N484 410 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 ZBTB14O43829 449 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 LCMT2O60294 686 aaKnown RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 UQCRHP07919 91 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 C8orf89P0DMQ9 161 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 IL1RNP18510 177 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 FDXRP22570 491 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 COILP38432 576 aaPredicted RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 BCL6P41182 706 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 PGGT1BP53609 377 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 PER3P56645 1201 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 TBPL1P62380 186 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 CSNK1G2P78368 415 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 PMP22Q01453 160 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 FAM53BQ14153 422 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 ZXDCQ2QGD7 858 aaPredicted RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 HSP90AA5PQ58FG0 334 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 RIPOR1Q6ZS17 1223 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 LRRC8AQ8IWT6 810 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 RASGEF1CQ8N431 466 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 KCT2Q8NC54 265 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 OR51Q1Q8NH59 317 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 EEF1AKMT1Q8WVE0 214 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 NR4A3Q92570 626 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 CYTH2Q99418 400 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 AARSD1Q9BTE6 412 aaKnown RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 ATG10Q9H0Y0 220 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 CCDC68Q9H2F9 335 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 XAB2Q9HCS7 855 aaKnown RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 IARS2Q9NSE4 1012 aaKnown RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 UTP6Q9NYH9 597 aaKnown RBP12.56□□□□□ -0.4
TGFB3-204ENST00000556285 PDE10AQ9Y233 779 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 PPP2R2CQ9Y2T4 447 aa12.56□□□□□ -0.4
TGFB3-204ENST00000556285 A8MUI8 341 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 TXNDC9O14530 226 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 MAN1A2O60476 641 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 DNAJB6O75190 326 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 BANF1O75531 89 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 ENO3P13929 434 aaPredicted RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 GABRB3P28472 473 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 AVPR1BP47901 424 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 CDKN2DP55273 166 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 MINDY4Q4G0A6 757 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 GFRALQ6UXV0 394 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 PDSS2Q86YH6 399 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 NAT8LQ8N9F0 302 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 ZCCHC10Q8TBK6 192 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 RELTQ969Z4 430 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 ALKBH8Q96BT7 664 aaKnown RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 TM4SF19Q96DZ7 209 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 EBNA1BP2Q99848 306 aaKnown RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 TUBB6Q9BUF5 446 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 CCDC177Q9NQR7 707 aaPredicted RBP12.55□□□□□ -0.4
TGFB3-204ENST00000556285 STMN3Q9NZ72 180 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 SLC17A6Q9P2U8 582 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 CELSR1Q9NYQ6 3014 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 PCNX1Q96RV3 2341 aa12.55□□□□□ -0.4
TGFB3-204ENST00000556285 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 A0A1B0GUH1 482 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 OR5H15A6NDH6 313 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 H0YIG0 161 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 PRAMEF2O60811 474 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 RDH16O75452 317 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 UNC5CO95185 931 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 NSA2O95478 260 aaKnown RBP12.54□□□□□ -0.4
TGFB3-204ENST00000556285 B3GALT4O96024 378 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 CDH1P12830 882 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 XCR1P46094 333 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 RPS15AP62244 130 aaKnown RBP12.54□□□□□ -0.4
TGFB3-204ENST00000556285 MEF2AQ02078 507 aaPredicted RBP12.54□□□□□ -0.4
TGFB3-204ENST00000556285 NAE1Q13564 534 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 PHKG1Q16816 387 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 BTBD16Q32M84 506 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 AGTRAPQ6RW13 159 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 PAQR3Q6TCH7 311 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 CPEB2Q7Z5Q1 589 aaKnown RBP12.54□□□□□ -0.4
TGFB3-204ENST00000556285 ANKRD37Q7Z713 158 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 SLC26A11Q86WA9 606 aa12.54□□□□□ -0.4
TGFB3-204ENST00000556285 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms